C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuron navigator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367302 NAV1-006 ENSG00000134369 9606 + 1:201622927-201823344 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLungPlacentaENST00000367302
Transcript ID Adipose Bladder Breast Colon Heart Lung Placenta
ENST00000367302 7.608±0.00 0.574±0.00 0.915±0.00 2.247±1.41 2.929±0.00 2.777±2.06 3.177±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LW CIL_0001LW_0002 CGP 1:201483530-201826969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190298 Nav1-002 protein_coding Mus_musculus 0 7703
ENSMUST00000040599 Nav1-201 protein_coding Mus_musculus 0 3757
ENSMUST00000067414 Nav1-001 protein_coding Mus_musculus 0 3757
ENSMUST00000190130 Nav1-004 processed_transcript Mus_musculus 0 2231
ENSMUST00000189362 Nav1-003 retained_intron Mus_musculus 0 2231
ENSMUST00000189252 Nav1-006 protein_coding Mus_musculus 0 549
ENSMUST00000187311 Nav1-007 retained_intron Mus_musculus 0 420
ENSDART00000115403 NAV1 (2 of 3)-201 protein_coding Danio_rerio 0 255
ENSMUST00000190735 Nav1-005 retained_intron Mus_musculus 6e-29 135

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