C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 165
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134851 TMEM165 9606 + 4:55395957-55453397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381334 TMEM165-001 55395957-55426172 protein_coding
  ENST00000502797 TMEM165-008 55403243-55412156 retained_intron
  ENST00000506103 TMEM165-012 55417919-55452458 nonsense_mediated_decay
  ENST00000506198 TMEM165-006 55395957-55425657 protein_coding
  ENST00000508404 TMEM165-002 55395963-55425804 nonsense_mediated_decay
  ENST00000508561 TMEM165-009 55416923-55425537 processed_transcript
  ENST00000509575 TMEM165-010 55417691-55424812 retained_intron
  ENST00000511710 TMEM165-007 55398923-55417245 processed_transcript
  ENST00000514070 TMEM165-005 55396251-55397405 processed_transcript
  ENST00000514904 TMEM165-003 55415271-55425545 processed_transcript
  ENST00000515591 TMEM165-004 55423114-55425631 retained_intron
  ENST00000608091 TMEM165-013 55417129-55453397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381334ENST00000508404ENST00000508561
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381334 19.338±0.00 23.478±0.00 18.211±0.00 15.831±2.29 11.143±1.95 9.159±5.28 34.765±0.00 6.063±0.00 16.923±9.25 2.989±0.00 17.003±5.84 25.831±12.12 16.872±0.00
ENST00000508404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.496±0.00 33.199±0.00 N/A
ENST00000508561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.380±0.00 18.998±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025I CIL_00025I_0001 CGP 4:55346109-55453397
CIL_00025L CIL_00025L_0001 CGP 4:55395957-55547138

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005765 IDA lysosomal membrane
GO:0005794 IDA Golgi apparatus
GO:0006487 IMP protein N-linked glycosylation
GO:0006874 IGI cellular calcium ion homeostasis
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032472 IDA Golgi calcium ion transport
GO:0032588 IDA trans-Golgi network membrane
GO:0035751 IMP regulation of lysosomal lumen pH
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034600 tmem165 transmembrane protein 165 protein_coding Danio_rerio
ENSMUSG00000029234 Tmem165 transmembrane protein 165 protein_coding Mus_musculus

Loading