| Transcript ID | Breast |
|---|---|
| ENST00000257895 | 9.781±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | retinol dehydrogenase 5 (11-cis/9-cis) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000135437  |
RDH5 | 9606 | + |
12:55720367-55724705  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000257895 |
RDH5-001 | 55720398-55724705 | protein_coding | ||
| ENST00000547072 |
RDH5-008 | 55720367-55724606 | protein_coding | ||
| ENST00000547301 |
RDH5-006 | 55720489-55721828 | retained_intron | ||
| ENST00000548082 |
RDH5-002 | 55720413-55724705 | protein_coding | ||
| ENST00000548123 |
RDH5-007 | 55721195-55724438 | nonsense_mediated_decay | ||
| ENST00000548486 |
RDH5-004 | 55720393-55722339 | retained_intron | ||
| ENST00000550608 |
RDH5-003 | 55720411-55722658 | retained_intron | ||
| ENST00000551444 |
RDH5-011 | 55723367-55724614 | retained_intron | ||
| ENST00000552930 |
RDH5-010 | 55720393-55721836 | protein_coding | ||
| ENST00000553160 |
RDH5-005 | 55720367-55722311 | processed_transcript | ||
| ENST00000553187 |
RDH5-009 | 55720393-55721993 | retained_intron | ||
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001523 | TAS | retinoid metabolic process |
| GO:0004745 | TAS | retinol dehydrogenase activity |
| GO:0005788 | IEA | endoplasmic reticulum lumen |
| GO:0005789 | TAS | endoplasmic reticulum membrane |
| GO:0007601 | IEA | visual perception |
| GO:0007603 | TAS | phototransduction, visible light |
| GO:0008152 | IEA | metabolic process |
| GO:0016491 | IEA | oxidoreductase activity |
| GO:0042572 | IEA | retinol metabolic process |
| GO:0044297 | IEA | cell body |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000008306
|
rdh5 | retinol dehydrogenase 5 (11-cis/9-cis) | protein_coding | Danio_rerio | |
|
ENSMUSG00000025350
|
Rdh5 | retinol dehydrogenase 5 | protein_coding | Mus_musculus | |
