C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinol dehydrogenase 5 (11-cis/9-cis)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008306 rdh5 7955 - 22:10223023-10232030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000002348 rdh5-201 10223023-10232030 protein_coding
  ENSDART00000128590 rdh5-001 10223181-10228073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000002348ENSDART00000128590
Transcript ID Brain Heart Kidney Muscle
ENSDART00000002348 0.282±0.02 1.204±0.75 1.750±0.28 N/A
ENSDART00000128590 0.211±0.00 0.209±0.16 0.244±0.00 0.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HO CIL_0007HO_0001 CGP 22:10223023-10238094

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001754 IMP eye photoreceptor cell differentiation
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0035238 IDA vitamin A biosynthetic process
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000135437 RDH5 retinol dehydrogenase 5 (11-cis/9-cis) protein_coding Homo_sapiens
ENSMUSG00000025350 Rdh5 retinol dehydrogenase 5 protein_coding Mus_musculus

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