C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 85
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135443 KRT85 9606 - 12:52360006-52367481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257901 KRT85-001 52360006-52367481 protein_coding
  ENST00000544265 KRT85-002 52360556-52364622 protein_coding
  ENST00000552537 KRT85-003 52362851-52364629 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastPlacentaTestisENST00000257901ENST00000544265ENST00000552537
Transcript ID Adipose Breast Placenta Testis
ENST00000257901 0.028±0.00 N/A 0.060±0.03 0.217±0.10
ENST00000544265 N/A 0.114±0.00 0.139±0.00 0.248±0.00
ENST00000552537 N/A N/A 0.079±0.00 0.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000F CGP 12:52314301-52367481
CIL_00033Q CIL_00033Q_0003 CGP 12:52360006-52385652

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio

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