C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 85
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257901 KRT85-001 ENSG00000135443 9606 - 12:52360006-52367481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposePlacentaTestisENST00000257901
Transcript ID Adipose Placenta Testis
ENST00000257901 0.028±0.00 0.060±0.03 0.217±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000F CGP 12:52314301-52367481
CIL_00033Q CIL_00033Q_0003 CGP 12:52360006-52385652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0 1471
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 1351
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 1330
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 1314
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 0 721
ENSMUST00000023713 Krt82-201 protein_coding Mus_musculus 0 555
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 0 516
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 363
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 348
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 287
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 4e-30 137
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 7e-18 97
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0.0000000000007 81
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0.0000000000007 81
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000000004 71
ENSDART00000064983 krt1-c5-201 protein_coding Danio_rerio 0.0000003 62
ENSDART00000139066 krt1-c5-001 protein_coding Danio_rerio 0.0000003 62

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