C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 85
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544265 KRT85-002 ENSG00000135443 9606 - 12:52360556-52364622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaTestisENST00000544265
Transcript ID Breast Placenta Testis
ENST00000544265 0.114±0.00 0.139±0.00 0.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000F CGP 12:52314301-52367481
CIL_00033Q CIL_00033Q_0003 CGP 12:52360006-52385652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0 918
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 789
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 776
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 761
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 0 721
ENSMUST00000023713 Krt82-201 protein_coding Mus_musculus 0 403
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 0 377
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 291
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 243
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 4e-18 97
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0.0000000000004 81
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0.0000000000004 81
ENSDART00000064983 krt1-c5-201 protein_coding Danio_rerio 0.0000001 62
ENSDART00000139066 krt1-c5-001 protein_coding Danio_rerio 0.0000001 62

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