C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testis specific, 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135951 TSGA10 9606 - 2:98997261-99154964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355053 TSGA10-002 98997886-99141572 protein_coding
  ENST00000393482 TSGA10-003 99018200-99141419 protein_coding
  ENST00000393483 TSGA10-001 98997261-99154917 protein_coding
  ENST00000409564 TSGA10-005 99018200-99127176 protein_coding
  ENST00000410001 TSGA10-007 98997886-99118779 protein_coding
  ENST00000462782 TSGA10-012 99117567-99141421 retained_intron
  ENST00000464459 TSGA10-004 99124767-99141149 retained_intron
  ENST00000465216 TSGA10-016 99148264-99154890 processed_transcript
  ENST00000471174 TSGA10-010 99109514-99154962 processed_transcript
  ENST00000476849 TSGA10-009 99117128-99154964 processed_transcript
  ENST00000478090 TSGA10-006 99064930-99127146 processed_transcript
  ENST00000483914 TSGA10-018 99148264-99154869 processed_transcript
  ENST00000488960 TSGA10-015 99068926-99127168 processed_transcript
  ENST00000489348 TSGA10-019 99148265-99154861 processed_transcript
  ENST00000489546 TSGA10-008 99018200-99078928 processed_transcript
  ENST00000489926 TSGA10-014 99109403-99141149 processed_transcript
  ENST00000494483 TSGA10-011 99117544-99141421 processed_transcript
  ENST00000497915 TSGA10-013 99109501-99141180 processed_transcript
  ENST00000498097 TSGA10-017 99148264-99154636 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderTestisENST00000355053ENST00000393482ENST00000393483ENST00000464459ENST00000478090
Transcript ID Bladder Testis
ENST00000355053 1.241±0.00 8.931±0.00
ENST00000393482 N/A 17.175±8.40
ENST00000393483 N/A 7.622±2.74
ENST00000464459 1.824±0.00 N/A
ENST00000478090 N/A 23.603±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0001 CGP 2:98793846-99154964

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007283 TAS spermatogenesis
GO:0016020 IEA membrane
GO:0030031 IEA cell projection assembly
GO:0031514 IEA motile cilium
GO:0043005 IEA neuron projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052512 tsga10 testis specific, 10 protein_coding Danio_rerio
ENSMUSG00000060771 Tsga10 testis specific 10 protein_coding Mus_musculus

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