C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testis specific 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060771 Tsga10 10090 - 1:37754572-37865298 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041815 Tsga10-001 37754572-37865079 protein_coding
  ENSMUST00000088072 Tsga10-002 37760823-37865298 protein_coding
  ENSMUST00000114902 Tsga10-003 37760823-37855374 protein_coding
  ENSMUST00000123082 Tsga10-006 37832406-37864836 retained_intron
  ENSMUST00000134024 Tsga10-007 37840062-37843721 retained_intron
  ENSMUST00000151735 Tsga10-004 37801463-37855347 nonsense_mediated_decay
  ENSMUST00000155852 Tsga10-005 37833435-37865073 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041815ENSMUST00000088072ENSMUST00000114902ENSMUST00000123082ENSMUST00000134024ENSMUST00000151735ENSMUST00000155852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041815 0.150±0.00 0.154±0.00 0.426±0.00 1.339±0.00 0.141±0.05 N/A 0.109±0.00 0.079±0.00 0.092±0.00 0.223±0.04 N/A 0.456±0.29 N/A 14.712±3.54
ENSMUST00000088072 N/A 0.192±0.11 N/A N/A 0.071±0.00 N/A N/A N/A 0.042±0.00 0.262±0.06 N/A N/A N/A 5.166±0.83
ENSMUST00000114902 N/A N/A N/A 1.972±0.00 N/A 0.150±0.00 N/A N/A N/A N/A 0.251±0.03 0.717±0.49 N/A 21.047±31.16
ENSMUST00000123082 0.613±0.12 0.269±0.17 1.253±0.36 2.244±1.54 0.261±0.13 0.343±0.17 N/A 0.372±0.08 0.243±0.10 0.833±0.42 0.861±0.26 0.616±0.22 1.709±1.46 N/A
ENSMUST00000134024 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151735 N/A 0.221±0.01 N/A N/A 0.068±0.00 N/A N/A N/A 0.194±0.09 N/A N/A 1.514±0.00 2.574±1.88 41.301±0.00
ENSMUST00000155852 0.077±0.00 0.504±0.00 0.693±0.01 1.736±0.38 0.295±0.01 0.390±0.25 0.210±0.02 0.221±0.11 0.196±0.02 N/A N/A 0.570±0.15 1.326±0.74 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0002 CGP 1:37611677-37865298

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 ISA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0016020 IEA membrane
GO:0030031 IMP cell projection assembly
GO:0031514 IDA motile cilium
GO:0043005 IDA neuron projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052512 tsga10 testis specific, 10 protein_coding Danio_rerio
ENSG00000135951 TSGA10 testis specific, 10 protein_coding Homo_sapiens

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