C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136144 RCBTB1 9606 - 13:49531946-49585583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258646 RCBTB1-201 49531946-49567323 protein_coding
  ENST00000378302 RCBTB1-001 49531946-49585583 protein_coding
  ENST00000471984 RCBTB1-002 49533918-49539503 processed_transcript
  ENST00000490058 RCBTB1-003 49551171-49552252 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258646ENST00000378302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258646 0.529±0.00 1.592±0.00 1.826±0.00 5.606±0.00 4.195±0.00 1.364±0.00 N/A 4.391±0.00 0.503±0.00 N/A 0.494±0.17 2.394±1.17 2.081±0.34 2.071±0.84
ENST00000378302 3.261±0.00 1.749±0.00 N/A 4.919±0.99 3.040±0.00 0.847±0.42 3.237±1.42 1.561±0.43 2.215±0.59 3.176±0.78 0.378±0.00 4.509±2.50 2.086±1.66 3.204±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020M CIL_00020M_0002 CGP 13:49531946-49633872

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036645 rcbtb1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein_coding Danio_rerio
ENSDARG00000090687 rcbtb2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein_coding Danio_rerio
ENSMUSG00000035469 Rcbtb1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein_coding Mus_musculus

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