C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sciellin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136155 SCEL 9606 + 13:77535674-77645263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349847 SCEL-002 77535760-77644509 protein_coding
  ENST00000377246 SCEL-001 77535759-77645263 protein_coding
  ENST00000469982 SCEL-004 77597028-77617641 processed_transcript
  ENST00000471491 SCEL-003 77535724-77612940 nonsense_mediated_decay
  ENST00000535157 SCEL-201 77535674-77645259 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000349847ENST00000377246ENST00000469982ENST00000471491ENST00000535157
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000349847 0.075±0.00 0.093±0.00 N/A 0.091±0.06 N/A 0.073±0.00 0.082±0.00 6.612±0.00 1.728±0.79 0.406±0.08 0.539±0.00
ENST00000377246 N/A N/A 0.067±0.00 N/A 0.012±0.00 N/A N/A 6.141±2.73 0.958±1.15 0.183±0.08 0.467±0.17
ENST00000469982 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471491 N/A N/A 0.015±0.00 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A
ENST00000535157 N/A N/A N/A 0.095±0.00 0.017±0.00 N/A N/A 3.856±0.00 1.511±1.22 0.232±0.09 0.369±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PP CIL_0004PP_0002 CGP 13:77044655-77645263
CIL_00086M CIL_00086M_0001 VISTA 13:77531993-78133579
CIL_0004FX CIL_0004FX_0002 CGP 13:77535674-77764242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001533 TAS cornified envelope
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0008270 IEA zinc ion binding
GO:0008544 ISS epidermis development
GO:0009790 ISS embryo development
GO:0016020 IEA membrane
GO:0030216 IDA keratinocyte differentiation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034677 scel sciellin protein_coding Danio_rerio
ENSMUSG00000022123 Scel sciellin protein_coding Mus_musculus

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