C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000001220-ENSDARG00000034677 CGP 7955 9:17562093-17850876
GeneTranscriptPositionBiotype
ENSDARG00000001220 (mycbp2)
MYC binding protein 2 		ENSDART00000039157 (mycbp2-001) 17562093-17802548 protein_coding
ENSDART00000124901 (mycbp2-201) 17562096-17802149 protein_coding
ENSDARG00000034677 (scel)
sciellin 		ENSDART00000048548 (scel-201) 17822395-17850874 protein_coding
ENSDART00000075926 (scel-001) 17822380-17850876 protein_coding
ENSDART00000133594 (scel-002) 17833385-17843724 processed_transcript
ENSDART00000140458 (scel-003) 17825276-17827899 retained_intron
ENSDART00000147943 (scel-004) 17847720-17850741 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0004PP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005810-ENSG00000136155 CGP 9606 13:77044655-77645263
GeneTranscriptPositionBiotype
ENSG00000005810 (MYCBP2)
MYC binding protein 2, E3 ubiquitin protein ligase 		ENST00000357337 (MYCBP2-201) 77044658-77327044 protein_coding
ENST00000429715 (MYCBP2-002) 77044902-77087514 protein_coding
ENST00000462987 (MYCBP2-007) 77098776-77118462 processed_transcript
ENST00000466564 (MYCBP2-006) 77121225-77125428 protein_coding
ENST00000474882 (MYCBP2-009) 77270031-77273511 processed_transcript
ENST00000482517 (MYCBP2-003) 77098068-77126516 processed_transcript
ENST00000485061 (MYCBP2-008) 77093286-77097646 processed_transcript
ENST00000486679 (MYCBP2-004) 77144117-77150778 processed_transcript
ENST00000491491 (MYCBP2-010) 77296603-77327050 processed_transcript
ENST00000498073 (MYCBP2-005) 77098885-77140943 processed_transcript
ENST00000544440 (MYCBP2-001) 77044655-77326679 protein_coding
ENST00000612956 (MYCBP2-202) 77044660-77058334 protein_coding
ENSG00000136155 (SCEL)
sciellin 		ENST00000349847 (SCEL-002) 77535760-77644509 protein_coding
ENST00000377246 (SCEL-001) 77535759-77645263 protein_coding
ENST00000469982 (SCEL-004) 77597028-77617641 processed_transcript
ENST00000471491 (SCEL-003) 77535724-77612940 nonsense_mediated_decay
ENST00000535157 (SCEL-201) 77535674-77645259 protein_coding
ENSG00000229521 (MYCBP2-AS2)
MYCBP2 antisense RNA 2 		ENST00000428716 (MYCBP2-AS2-001) 77080511-77081190 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0004PP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033004-ENSMUSG00000022123 CGP 10090 14:103113411-103613346
GeneTranscriptPositionBiotype
ENSMUSG00000022123 (Scel)
sciellin 		ENSMUST00000095576 (Scel-201) 103513341-103613346 protein_coding
ENSMUSG00000033004 (Mycbp2)
MYC binding protein 2 		ENSMUST00000159855 (Mycbp2-001) 103113411-103346800 protein_coding
ENSMUST00000160758 (Mycbp2-006) 103113411-103346418 protein_coding
ENSMUST00000161008 (Mycbp2-003) 103113411-103155263 protein_coding
ENSMUST00000161278 (Mycbp2-002) 103155313-103191615 protein_coding
ENSMUST00000162537 (Mycbp2-004) 103311695-103346814 retained_intron
ENSMUST00000162762 (Mycbp2-005) 103137573-103152214 retained_intron
ENSMUST00000162852 (Mycbp2-007) 103114133-103115396 processed_transcript
ENSMUSG00000098111 (Gm4654)
predicted gene 4654 		ENSMUST00000183305 (Gm4654-001) 103370465-103371446 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PP_0001ENSDARG00000001220ENSDART00000039157ENSDART00000124901ENSDARG00000034677ENSDART00000048548ENSDART00000075926ENSDART00000133594ENSDART00000140458ENSDART00000147943CIL_0004PP_0002ENSG00000005810ENST00000357337ENST00000429715ENST00000462987ENST00000466564ENST00000474882ENST00000482517ENST00000485061ENST00000486679ENST00000491491ENST00000498073ENST00000544440ENST00000612956ENSG00000136155ENST00000349847ENST00000377246ENST00000469982ENST00000471491ENST00000535157ENSG00000229521ENST00000428716CIL_0004PP_0003ENSMUSG00000022123ENSMUST00000095576ENSMUSG00000033004ENSMUST00000159855ENSMUST00000160758ENSMUST00000161008ENSMUST00000161278ENSMUST00000162537ENSMUST00000162762ENSMUST00000162852ENSMUSG00000098111ENSMUST00000183305
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PP_0001ENSDARG00000001220ENSDART00000039157ENSDART00000124901ENSDARG00000034677ENSDART00000048548ENSDART00000075926ENSDART00000133594ENSDART00000147943CIL_0004PP_0002ENSG00000005810ENST00000357337ENST00000429715ENST00000544440ENST00000612956ENSG00000136155ENST00000349847ENST00000377246ENST00000469982ENST00000471491ENST00000535157ENSG00000229521ENST00000428716CIL_0004PP_0003ENSMUSG00000022123ENSMUST00000095576ENSMUSG00000033004ENSMUST00000159855ENSMUST00000160758ENSMUST00000161008ENSMUST00000161278ENSMUSG00000098111ENSMUST00000183305
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001220 ENSDART00000039157 N/A N/A N/A 10.654±0.00 N/A N/A 1.724±0.24 1.546±0.00 0.371±0.00 N/A 0.810±0.00 N/A N/A N/A
ENSDART00000124901 N/A N/A N/A 4.530±3.31 N/A N/A 1.768±1.04 4.451±1.93 0.511±0.00 N/A 1.459±0.00 N/A N/A N/A
ENSDARG00000034677 ENSDART00000048548 N/A N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000075926 N/A N/A N/A 0.177±0.10 N/A N/A 0.462±0.06 0.991±0.00 0.229±0.00 N/A 0.123±0.00 N/A N/A N/A
ENSDART00000133594 N/A N/A N/A 0.980±0.66 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000140458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147943 N/A N/A N/A 0.388±0.04 N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005810 ENST00000357337 3.172±0.00 1.986±0.00 N/A N/A 1.325±0.00 0.801±0.00 1.558±0.00 N/A 0.353±0.00 1.155±0.58 N/A N/A N/A N/A
ENST00000429715 13.708±0.00 9.732±0.00 N/A 11.570±0.00 12.558±0.00 6.764±0.00 3.505±0.00 3.897±0.00 2.174±0.00 4.706±0.00 2.524±0.00 4.274±1.13 2.841±1.33 8.908±0.46
ENST00000462987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544440 3.559±0.00 N/A 1.702±0.00 3.586±0.00 5.970±2.37 4.357±2.71 1.560±0.00 0.906±0.34 4.270±3.92 0.573±0.00 N/A 1.694±1.11 0.986±0.38 2.003±0.08
ENST00000612956 N/A 8.397±0.00 N/A 11.006±0.00 N/A N/A N/A 4.926±0.00 2.346±0.00 3.232±0.00 N/A 5.477±1.55 2.621±0.04 8.050±0.00
ENSG00000136155 ENST00000349847 0.075±0.00 N/A 0.093±0.00 N/A N/A 0.091±0.06 N/A 0.073±0.00 0.082±0.00 6.612±0.00 N/A 1.728±0.79 0.406±0.08 0.539±0.00
ENST00000377246 N/A N/A N/A N/A 0.067±0.00 N/A 0.012±0.00 N/A N/A 6.141±2.73 N/A 0.958±1.15 0.183±0.08 0.467±0.17
ENST00000469982 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471491 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A
ENST00000535157 N/A N/A N/A N/A N/A 0.095±0.00 0.017±0.00 N/A N/A 3.856±0.00 N/A 1.511±1.22 0.232±0.09 0.369±0.00
ENSG00000229521 ENST00000428716 N/A 0.210±0.00 N/A N/A 1.167±0.00 N/A 0.122±0.00 N/A N/A N/A N/A 0.579±0.00 0.176±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022123 ENSMUST00000095576 0.134±0.05 0.067±0.04 0.354±0.07 0.251±0.13 0.509±0.03 0.401±0.16 0.084±0.05 1.362±0.07 0.060±0.02 5.770±0.50 0.099±0.06 0.179±0.07 7.328±10.00 0.127±0.08
ENSMUSG00000033004 ENSMUST00000159855 1.531±0.00 1.435±0.00 N/A 4.932±1.19 1.475±0.00 1.151±0.66 0.546±0.00 0.842±0.09 N/A 1.468±0.57 0.805±0.23 2.369±0.62 0.856±0.00 N/A
ENSMUST00000160758 1.724±0.37 2.475±0.79 2.155±0.89 N/A 1.806±0.76 N/A 0.887±0.09 1.029±0.15 0.566±0.22 1.847±0.40 1.235±0.27 5.037±2.46 4.126±2.97 5.555±0.00
ENSMUST00000161008 14.825±6.06 11.778±1.21 18.143±1.90 32.503±2.95 10.607±2.31 6.197±1.44 3.822±0.39 6.272±0.82 3.672±1.83 8.404±0.86 5.380±0.63 11.831±1.83 14.425±4.60 8.585±1.26
ENSMUST00000161278 N/A N/A N/A 16.075±0.00 N/A N/A N/A N/A N/A N/A N/A 10.861±0.00 8.218±1.71 N/A
ENSMUST00000162537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098111 ENSMUST00000183305 4.879±2.48 0.199±0.05 2.301±1.91 0.988±1.22 2.969±1.47 0.418±0.32 2.799±1.37 0.926±0.44 1.252±2.19 0.471±0.12 0.470±0.08 2.833±2.37 0.280±0.16 0.179±0.07

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