C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034677-ENSDARG00000019185 CGP 7955 9:17822380-17902674
GeneTranscriptPositionBiotype
ENSDARG00000019185 (slain1a)
SLAIN motif family, member 1a 		ENSDART00000012747 (slain1a-201) 17865070-17902232 protein_coding
ENSDART00000147488 (slain1a-001) 17864963-17902674 protein_coding
ENSDARG00000034677 (scel)
sciellin 		ENSDART00000048548 (scel-201) 17822395-17850874 protein_coding
ENSDART00000075926 (scel-001) 17822380-17850876 protein_coding
ENSDART00000133594 (scel-002) 17833385-17843724 processed_transcript
ENSDART00000140458 (scel-003) 17825276-17827899 retained_intron
ENSDART00000147943 (scel-004) 17847720-17850741 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0004FX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136155-ENSG00000139737 CGP 9606 13:77535674-77764242
GeneTranscriptPositionBiotype
ENSG00000136155 (SCEL)
sciellin 		ENST00000349847 (SCEL-002) 77535760-77644509 protein_coding
ENST00000377246 (SCEL-001) 77535759-77645263 protein_coding
ENST00000469982 (SCEL-004) 77597028-77617641 processed_transcript
ENST00000471491 (SCEL-003) 77535724-77612940 nonsense_mediated_decay
ENST00000535157 (SCEL-201) 77535674-77645259 protein_coding
ENSG00000139737 (SLAIN1)
SLAIN motif family, member 1 		ENST00000267219 (SLAIN1-008) 77719598-77764229 protein_coding
ENST00000314070 (SLAIN1-201) 77741160-77764242 protein_coding
ENST00000351546 (SLAIN1-202) 77741160-77764242 protein_coding
ENST00000358679 (SLAIN1-001) 77743105-77764227 protein_coding
ENST00000377236 (SLAIN1-006) 77698882-77744372 protein_coding
ENST00000418532 (SLAIN1-203) 77697854-77764242 protein_coding
ENST00000422114 (SLAIN1-003) 77697888-77746654 protein_coding
ENST00000441784 (SLAIN1-002) 77741219-77760990 protein_coding
ENST00000442759 (SLAIN1-004) 77698423-77753282 protein_coding
ENST00000446759 (SLAIN1-005) 77698423-77746855 protein_coding
ENST00000462234 (SLAIN1-011) 77741356-77746750 protein_coding
ENST00000465831 (SLAIN1-010) 77741200-77746807 processed_transcript
ENST00000466548 (SLAIN1-009) 77697888-77764124 protein_coding
ENST00000474663 (SLAIN1-013) 77742749-77753241 protein_coding
ENST00000481614 (SLAIN1-014) 77743057-77744407 protein_coding
ENST00000488699 (SLAIN1-007) 77698881-77763357 protein_coding
ENST00000496045 (SLAIN1-012) 77741538-77746858 protein_coding
ENSG00000227922 (SPTLC1P5)
serine palmitoyltransferase, long chain base subunit 1 pseudogene 5 		ENST00000450718 (SPTLC1P5-001) 77659413-77659664 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004FX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022123-ENSMUSG00000055717 CGP 10090 14:103513341-103704907
GeneTranscriptPositionBiotype
ENSMUSG00000022123 (Scel)
sciellin 		ENSMUST00000095576 (Scel-201) 103513341-103613346 protein_coding
ENSMUSG00000055717 (Slain1)
SLAIN motif family, member 1 		ENSMUST00000069443 (Slain1-001) 103650228-103704907 protein_coding
ENSMUST00000159456 (Slain1-003) 103664498-103704802 protein_coding
ENSMUST00000160805 (Slain1-002) 103650646-103704310 protein_coding
ENSMUST00000162818 (Slain1-004) 103655771-103688357 protein_coding
ENSMUSG00000089707 (Slain1os)
SLAIN motif family, member 1, opposite strand 		ENSMUST00000160117 (Slain1os-001) 103692983-103699442 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FX_0001ENSDARG00000019185ENSDART00000012747ENSDART00000147488ENSDARG00000034677ENSDART00000048548ENSDART00000075926ENSDART00000133594ENSDART00000140458ENSDART00000147943CIL_0004FX_0002ENSG00000136155ENST00000349847ENST00000377246ENST00000469982ENST00000471491ENST00000535157ENSG00000139737ENST00000267219ENST00000314070ENST00000351546ENST00000358679ENST00000377236ENST00000418532ENST00000422114ENST00000441784ENST00000442759ENST00000446759ENST00000462234ENST00000465831ENST00000466548ENST00000474663ENST00000481614ENST00000488699ENST00000496045ENSG00000227922ENST00000450718CIL_0004FX_0003ENSMUSG00000022123ENSMUST00000095576ENSMUSG00000055717ENSMUST00000069443ENSMUST00000159456ENSMUST00000160805ENSMUST00000162818ENSMUSG00000089707ENSMUST00000160117
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FX_0001ENSDARG00000019185ENSDART00000012747ENSDART00000147488ENSDARG00000034677ENSDART00000048548ENSDART00000075926ENSDART00000133594ENSDART00000147943CIL_0004FX_0002ENSG00000136155ENST00000349847ENST00000377246ENST00000469982ENST00000471491ENST00000535157ENSG00000139737ENST00000267219ENST00000314070ENST00000351546ENST00000358679ENST00000377236ENST00000418532ENST00000422114ENST00000441784ENST00000442759ENST00000446759ENST00000466548ENST00000474663ENST00000488699ENST00000496045ENSG00000227922ENST00000450718CIL_0004FX_0003ENSMUSG00000022123ENSMUST00000095576ENSMUSG00000055717ENSMUST00000069443ENSMUST00000159456ENSMUST00000160805ENSMUST00000162818ENSMUSG00000089707ENSMUST00000160117
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019185 ENSDART00000012747 N/A N/A N/A N/A N/A N/A 0.083±0.00 0.033±0.00 0.018±0.00 N/A N/A N/A N/A N/A
ENSDART00000147488 N/A N/A N/A 4.327±0.00 N/A N/A N/A 0.321±0.15 N/A N/A 0.889±0.00 N/A N/A N/A
ENSDARG00000034677 ENSDART00000048548 N/A N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000075926 N/A N/A N/A 0.177±0.10 N/A N/A 0.462±0.06 0.991±0.00 0.229±0.00 N/A 0.123±0.00 N/A N/A N/A
ENSDART00000133594 N/A N/A N/A 0.980±0.66 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000140458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147943 N/A N/A N/A 0.388±0.04 N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136155 ENST00000349847 0.075±0.00 N/A 0.093±0.00 N/A N/A 0.091±0.06 N/A 0.073±0.00 0.082±0.00 6.612±0.00 N/A 1.728±0.79 0.406±0.08 0.539±0.00
ENST00000377246 N/A N/A N/A N/A 0.067±0.00 N/A 0.012±0.00 N/A N/A 6.141±2.73 N/A 0.958±1.15 0.183±0.08 0.467±0.17
ENST00000469982 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471491 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A
ENST00000535157 N/A N/A N/A N/A N/A 0.095±0.00 0.017±0.00 N/A N/A 3.856±0.00 N/A 1.511±1.22 0.232±0.09 0.369±0.00
ENSG00000139737 ENST00000267219 0.381±0.00 1.610±0.00 N/A 33.873±0.00 N/A 1.262±0.00 0.326±0.00 0.388±0.00 0.262±0.00 N/A 1.172±0.00 0.308±0.25 0.929±0.00 9.703±0.00
ENST00000314070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.147±0.00
ENST00000351546 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000358679 N/A N/A 0.160±0.00 24.706±0.00 N/A N/A 0.067±0.00 N/A N/A N/A N/A 0.083±0.00 N/A N/A
ENST00000377236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.636±0.00 N/A N/A
ENST00000418532 0.382±0.00 N/A N/A 11.710±0.14 N/A 0.213±0.00 N/A 0.477±0.00 0.346±0.00 1.035±0.00 0.218±0.00 1.394±0.00 N/A N/A
ENST00000422114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENST00000441784 N/A N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442759 0.394±0.00 N/A 0.883±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446759 N/A N/A N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A N/A N/A N/A
ENST00000462234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466548 N/A 0.421±0.00 N/A N/A 0.060±0.00 0.755±0.00 0.567±0.27 1.669±0.00 0.973±0.00 1.683±0.32 N/A 0.772±0.00 0.749±0.29 6.232±0.00
ENST00000474663 N/A N/A N/A N/A N/A N/A N/A 1.393±0.00 N/A N/A N/A 0.250±0.00 0.630±0.00 N/A
ENST00000481614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A
ENST00000496045 N/A N/A N/A N/A N/A 1.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227922 ENST00000450718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022123 ENSMUST00000095576 0.134±0.05 0.067±0.04 0.354±0.07 0.251±0.13 0.509±0.03 0.401±0.16 0.084±0.05 1.362±0.07 0.060±0.02 5.770±0.50 0.099±0.06 0.179±0.07 7.328±10.00 0.127±0.08
ENSMUSG00000055717 ENSMUST00000069443 0.841±0.76 0.751±0.29 0.214±0.09 9.469±4.41 2.942±1.12 2.241±0.48 0.098±0.05 1.008±0.13 0.138±0.08 1.857±0.61 0.245±0.00 4.457±1.53 0.309±0.11 1.925±0.50
ENSMUST00000159456 N/A 0.322±0.00 N/A N/A N/A 1.814±0.00 0.080±0.02 0.387±0.07 0.131±0.07 0.555±0.00 N/A 0.922±0.00 N/A 1.372±0.00
ENSMUST00000160805 1.134±0.42 0.503±0.19 0.130±0.06 13.291±2.61 1.028±0.92 0.919±0.19 0.025±0.00 0.441±0.17 0.071±0.01 0.845±0.42 0.072±0.06 2.190±1.05 0.438±0.14 1.124±0.24
ENSMUST00000162818 0.105±0.00 N/A N/A N/A 2.513±1.02 N/A 0.117±0.07 N/A 0.248±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000089707 ENSMUST00000160117 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.01 N/A N/A N/A N/A N/A

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