C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 6 superfamily member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136404 TM6SF1 9606 + 15:83107407-83144854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258909 TM6SF1-004 83107658-83137408 nonsense_mediated_decay
  ENST00000322019 TM6SF1-001 83107407-83137359 protein_coding
  ENST00000379384 TM6SF1-003 83107648-83137281 nonsense_mediated_decay
  ENST00000379390 TM6SF1-006 83107572-83137408 protein_coding
  ENST00000561551 TM6SF1-010 83127404-83144854 protein_coding
  ENST00000564988 TM6SF1-008 83107683-83120086 processed_transcript
  ENST00000565774 TM6SF1-005 83107681-83136672 protein_coding
  ENST00000565982 TM6SF1-009 83107711-83126818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000565774ENST00000565982
Transcript ID Muscle
ENST00000565774 2.766±0.04
ENST00000565982 3.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L6 CIL_0001L6_0001 CGP 15:83107407-83208018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038623 Tm6sf1 transmembrane 6 superfamily member 1 protein_coding Mus_musculus

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