C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transmembrane 6 superfamily member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000322019  |
TM6SF1-001 |
ENSG00000136404 |
9606 | + |
15:83107407-83137359  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001L6 | CIL_0001L6_0001 | CGP | 15:83107407-83208018 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000041890
|
Tm6sf1-001 | protein_coding | Mus_musculus | 0 | 1482 |
|
ENSMUST00000119543
|
Tm6sf1-005 | protein_coding | Mus_musculus | 0 | 1290 |
|
ENSMUST00000124616
|
Tm6sf1-003 | retained_intron | Mus_musculus | 0 | 843 |
|
ENSMUST00000130006
|
Tm6sf1-007 | retained_intron | Mus_musculus | 0 | 649 |
|
ENSMUST00000126334
|
Tm6sf1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 590 |
|
ENSMUST00000107305
|
Hdgfrp3-001 | protein_coding | Mus_musculus | 0 | 263 |
