C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-myristoyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136448 NMT1 9606 + 17:45051610-45109016 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258960 NMT1-201 45061312-45109009 protein_coding
  ENST00000543908 NMT1-003 45061320-45098843 nonsense_mediated_decay
  ENST00000585561 NMT1-006 45061334-45097244 nonsense_mediated_decay
  ENST00000587014 NMT1-004 45102963-45104322 retained_intron
  ENST00000587120 NMT1-010 45105644-45109016 processed_transcript
  ENST00000587670 NMT1-011 45105765-45108134 processed_transcript
  ENST00000588455 NMT1-012 45093631-45099436 retained_intron
  ENST00000588975 NMT1-002 45061306-45086535 processed_transcript
  ENST00000590114 NMT1-005 45061334-45098455 processed_transcript
  ENST00000590310 NMT1-008 45097128-45099820 retained_intron
  ENST00000591931 NMT1-009 45104617-45105986 retained_intron
  ENST00000592654 NMT1-007 45061679-45093756 protein_coding
  ENST00000592782 NMT1-001 45051610-45109016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258960 15.136±0.00 22.084±0.00 2.837±0.00 16.764±8.13 11.168±7.70 9.936±5.55 7.610±5.70 19.195±11.76 4.244±0.11 8.375±4.77 6.259±4.27 22.380±12.03 24.283±8.60 11.223±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D7 CIL_0004D7_0002 CGP 17:44959693-45061109
CIL_0006U9 CIL_0006U9_0001 CGP 17:45023340-45109016
CIL_0004D8 CIL_0004D8_0002 CGP 17:45051610-45133354

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0003824 TAS catalytic activity
GO:0004379 IEA glycylpeptide N-tetradecanoyltransferase activity
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006499 IEA N-terminal protein myristoylation
GO:0006915 TAS apoptotic process
GO:0007603 TAS phototransduction, visible light
GO:0009249 TAS protein lipoylation
GO:0015629 IDA actin cytoskeleton
GO:0016032 TAS viral process
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0019107 IEA myristoyltransferase activity
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030054 IDA cell junction
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052966 nmt1a N-myristoyltransferase 1a protein_coding Danio_rerio
ENSDARG00000057206 nmt1b N-myristoyltransferase 1b protein_coding Danio_rerio
ENSMUSG00000020936 Nmt1 N-myristoyltransferase 1 protein_coding Mus_musculus

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