C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052966-ENSDARG00000052957 CGP 7955 3:39232878-39300073
GeneTranscriptPositionBiotype
ENSDARG00000052957 (plcd3a)
phospholipase C, delta 3a 		ENSDART00000102674 (plcd3a-001) 39254864-39300073 protein_coding
ENSDARG00000052966 (nmt1a)
N-myristoyltransferase 1a 		ENSDART00000102678 (nmt1a-002) 39232878-39254459 nonsense_mediated_decay
ENSDART00000124845 (nmt1a-001) 39233642-39254701 protein_coding
CIL_0004D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136448-ENSG00000161714 CGP 9606 17:45051610-45133354
GeneTranscriptPositionBiotype
ENSG00000136448 (NMT1)
N-myristoyltransferase 1 		ENST00000258960 (NMT1-201) 45061312-45109009 protein_coding
ENST00000543908 (NMT1-003) 45061320-45098843 nonsense_mediated_decay
ENST00000585561 (NMT1-006) 45061334-45097244 nonsense_mediated_decay
ENST00000587014 (NMT1-004) 45102963-45104322 retained_intron
ENST00000587120 (NMT1-010) 45105644-45109016 processed_transcript
ENST00000587670 (NMT1-011) 45105765-45108134 processed_transcript
ENST00000588455 (NMT1-012) 45093631-45099436 retained_intron
ENST00000588975 (NMT1-002) 45061306-45086535 processed_transcript
ENST00000590114 (NMT1-005) 45061334-45098455 processed_transcript
ENST00000590310 (NMT1-008) 45097128-45099820 retained_intron
ENST00000591931 (NMT1-009) 45104617-45105986 retained_intron
ENST00000592654 (NMT1-007) 45061679-45093756 protein_coding
ENST00000592782 (NMT1-001) 45051610-45109016 protein_coding
ENSG00000181513 (ACBD4)
acyl-CoA binding domain containing 4 		ENST00000321854 (ACBD4-007) 45135708-45144176 protein_coding
ENST00000376955 (ACBD4-006) 45135694-45142959 protein_coding
ENST00000398322 (ACBD4-004) 45135687-45144181 protein_coding
ENST00000431281 (ACBD4-201) 45132600-45144172 protein_coding
ENST00000585553 (ACBD4-003) 45135649-45144176 retained_intron
ENST00000586279 (ACBD4-010) 45132629-45135704 processed_transcript
ENST00000586346 (ACBD4-002) 45135647-45143850 protein_coding
ENST00000587111 (ACBD4-009) 45132605-45135949 processed_transcript
ENST00000587976 (ACBD4-008) 45132600-45135865 processed_transcript
ENST00000589752 (ACBD4-012) 45136096-45137636 retained_intron
ENST00000589798 (ACBD4-014) 45136108-45137835 nonsense_mediated_decay
ENST00000590289 (ACBD4-011) 45135688-45137454 retained_intron
ENST00000591136 (ACBD4-013) 45136201-45138544 processed_transcript
ENST00000591859 (ACBD4-001) 45132631-45144176 protein_coding
ENST00000592162 (ACBD4-005) 45135690-45144176 protein_coding
ENST00000619916 (ACBD4-202) 45132600-45142610 protein_coding
ENSG00000200888 (Y_RNA)
Y RNA 		ENST00000364018 (Y_RNA.1-401) 45071442-45071543 misc_RNA
ENSG00000277249 (MIR6784)
microRNA 6784 		ENST00000611997 (MIR6784-201) 45114367-45114433 miRNA
CIL_0004D8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020936-ENSMUSG00000020937 CGP 10090 11:103028190-103101658
GeneTranscriptPositionBiotype
ENSMUSG00000020935 (Dcakd)
dephospho-CoA kinase domain containing 		ENSMUST00000021313 (Dcakd-001) 102994047-103017168 protein_coding
ENSMUST00000126365 (Dcakd-005) 103027262-103028333 processed_transcript
ENSMUST00000134335 (Dcakd-002) 102994049-102997548 retained_intron
ENSMUST00000152965 (Dcakd-004) 103026988-103028263 retained_intron
ENSMUST00000155490 (Dcakd-003) 102999644-103028304 protein_coding
ENSMUSG00000020936 (Nmt1)
N-myristoyltransferase 1 		ENSMUST00000021314 (Nmt1-001) 103028346-103068912 protein_coding
ENSMUST00000135332 (Nmt1-002) 103028190-103043198 processed_transcript
ENSMUST00000148795 (Nmt1-003) 103028585-103057484 processed_transcript
ENSMUSG00000020937 (Plcd3)
phospholipase C, delta 3 		ENSMUST00000103077 (Plcd3-001) 103070304-103101658 protein_coding
ENSMUST00000124740 (Plcd3-005) 103070585-103071750 processed_transcript
ENSMUST00000128650 (Plcd3-002) 103070304-103078294 protein_coding
ENSMUST00000142970 (Plcd3-003) 103081730-103101591 processed_transcript
ENSMUST00000143012 (Plcd3-004) 103080553-103101618 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004D8_0001ENSDARG00000052957ENSDART00000102674ENSDARG00000052966ENSDART00000102678ENSDART00000124845CIL_0004D8_0002ENSG00000136448ENST00000258960ENST00000543908ENST00000585561ENST00000587014ENST00000587120ENST00000587670ENST00000588455ENST00000588975ENST00000590114ENST00000590310ENST00000591931ENST00000592654ENST00000592782ENSG00000181513ENST00000321854ENST00000376955ENST00000398322ENST00000431281ENST00000585553ENST00000586279ENST00000586346ENST00000587111ENST00000587976ENST00000589752ENST00000589798ENST00000590289ENST00000591136ENST00000591859ENST00000592162ENST00000619916ENSG00000200888ENST00000364018ENSG00000277249ENST00000611997CIL_0004D8_0003ENSMUSG00000020935ENSMUST00000021313ENSMUST00000126365ENSMUST00000134335ENSMUST00000152965ENSMUST00000155490ENSMUSG00000020936ENSMUST00000021314ENSMUST00000135332ENSMUST00000148795ENSMUSG00000020937ENSMUST00000103077ENSMUST00000124740ENSMUST00000128650ENSMUST00000142970ENSMUST00000143012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004D8_0001ENSDARG00000052957ENSDART00000102674ENSDARG00000052966ENSDART00000102678ENSDART00000124845CIL_0004D8_0002ENSG00000136448ENST00000258960ENSG00000181513ENST00000321854ENSG00000200888ENST00000364018ENSG00000277249ENST00000611997CIL_0004D8_0003ENSMUSG00000020935ENSMUST00000021313ENSMUST00000134335ENSMUSG00000020936ENSMUST00000021314ENSMUST00000135332ENSMUST00000148795ENSMUSG00000020937ENSMUST00000103077ENSMUST00000124740ENSMUST00000128650ENSMUST00000143012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052957 ENSDART00000102674 N/A N/A N/A 3.344±0.97 N/A N/A 1.558±0.28 1.260±0.27 0.116±0.00 N/A 5.197±0.00 N/A N/A N/A
ENSDARG00000052966 ENSDART00000102678 N/A N/A N/A 12.315±5.51 N/A N/A 8.132±3.56 10.289±1.98 1.332±0.00 N/A 4.752±0.00 N/A N/A N/A
ENSDART00000124845 N/A N/A N/A 8.439±0.94 N/A N/A 3.546±1.34 9.712±0.00 0.648±0.00 N/A 3.582±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136448 ENST00000258960 15.136±0.00 22.084±0.00 2.837±0.00 16.764±8.13 11.168±7.70 9.936±5.55 7.610±5.70 19.195±11.76 4.244±0.11 8.375±4.77 6.259±4.27 22.380±12.03 24.283±8.60 11.223±2.12
ENST00000543908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181513 ENST00000321854 N/A N/A N/A N/A N/A N/A N/A N/A 19.252±0.00 N/A N/A N/A N/A N/A
ENST00000376955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200888 ENST00000364018 0.359±0.00 0.342±0.00 N/A N/A N/A N/A 0.161±0.00 N/A N/A 64.163±0.00 N/A N/A N/A N/A
ENSG00000277249 ENST00000611997 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.810±0.00 N/A 15.476±0.00 N/A 1.431±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020935 ENSMUST00000021313 27.239±5.24 41.459±3.71 18.684±2.87 60.820±31.46 22.573±1.40 22.181±3.02 13.757±0.62 13.852±0.64 18.217±5.17 18.956±2.21 N/A 53.987±16.16 73.806±39.35 9.483±0.70
ENSMUST00000126365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134335 N/A 11.764±0.00 N/A N/A N/A N/A 22.497±1.34 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020936 ENSMUST00000021314 17.564±5.37 12.283±1.00 15.525±5.73 18.621±7.79 13.664±3.90 9.303±2.39 9.059±1.75 11.169±3.05 11.886±4.25 8.787±3.19 11.807±1.55 15.049±2.80 24.787±5.64 12.949±4.13
ENSMUST00000135332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 219.441±0.00
ENSMUST00000148795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.581±1.46
ENSMUSG00000020937 ENSMUST00000103077 7.867±3.44 9.034±1.31 16.548±1.68 1.529±1.04 6.942±3.31 5.134±1.82 3.375±1.40 3.145±0.22 0.366±0.30 4.515±0.99 1.601±0.73 5.732±2.60 4.464±2.23 1.495±0.59
ENSMUST00000124740 N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A
ENSMUST00000128650 2.095±0.30 N/A 3.194±0.11 1.069±1.07 4.112±1.67 2.505±0.40 3.249±1.09 3.021±0.68 0.295±0.19 1.375±0.40 0.840±0.42 1.687±0.39 2.133±0.98 0.494±0.07
ENSMUST00000142970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143012 N/A 13.979±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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