C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-myristoyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258960 NMT1-201 ENSG00000136448 9606 + 17:45061312-45109009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258960 15.136±0.00 22.084±0.00 2.837±0.00 16.764±8.13 11.168±7.70 9.936±5.55 7.610±5.70 19.195±11.76 4.244±0.11 8.375±4.77 6.259±4.27 22.380±12.03 24.283±8.60 11.223±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D7 CIL_0004D7_0002 CGP 17:44959693-45061109
CIL_0006U9 CIL_0006U9_0001 CGP 17:45023340-45109016
CIL_0004D8 CIL_0004D8_0002 CGP 17:45051610-45133354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 TAS catalytic activity
GO:0004379 IEA glycylpeptide N-tetradecanoyltransferase activity
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006499 IEA N-terminal protein myristoylation
GO:0006915 TAS apoptotic process
GO:0007603 TAS phototransduction, visible light
GO:0009249 TAS protein lipoylation
GO:0015629 IDA actin cytoskeleton
GO:0016032 TAS viral process
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030054 IDA cell junction
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021314 Nmt1-001 protein_coding Mus_musculus 0 2604
ENSMUST00000148795 Nmt1-003 processed_transcript Mus_musculus 0 817
ENSMUST00000121536 Gm14679-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000135332 Nmt1-002 processed_transcript Mus_musculus 0 246

Loading