Source ID |
Type |
Tax ID |
Position |
mm568 |
VISTA |
9606 |
17:49956976-50560219 |
Gene | Transcript | Position | Biotype |
ENSG00000005884 (ITGA3)
integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
|
ENST00000007722 (ITGA3-020)
|
50056440-50089729 |
protein_coding |
ENST00000320031 (ITGA3-001)
|
50056110-50090480 |
protein_coding |
ENST00000504417 (ITGA3-018)
|
50080317-50081380 |
nonsense_mediated_decay |
ENST00000505306 (ITGA3-002)
|
50056068-50090480 |
retained_intron |
ENST00000505552 (ITGA3-011)
|
50071740-50074211 |
retained_intron |
ENST00000505612 (ITGA3-013)
|
50075460-50076733 |
retained_intron |
ENST00000506401 (ITGA3-003)
|
50055968-50076995 |
nonsense_mediated_decay |
ENST00000506437 (ITGA3-006)
|
50086329-50090481 |
retained_intron |
ENST00000506827 (ITGA3-014)
|
50076625-50090481 |
protein_coding |
ENST00000507771 (ITGA3-015)
|
50077400-50079016 |
retained_intron |
ENST00000508100 (ITGA3-009)
|
50056487-50064789 |
retained_intron |
ENST00000510809 (ITGA3-012)
|
50072160-50075700 |
nonsense_mediated_decay |
ENST00000512553 (ITGA3-010)
|
50070873-50074514 |
protein_coding |
ENST00000514834 (ITGA3-017)
|
50088213-50089815 |
retained_intron |
ENST00000515147 (ITGA3-016)
|
50078004-50079483 |
retained_intron |
ENST00000570989 (ITGA3-019)
|
50063538-50066032 |
retained_intron |
ENSG00000006282 (SPATA20)
spermatogenesis associated 20
|
ENST00000006658 (SPATA20-001)
|
50547089-50555852 |
protein_coding |
ENST00000356488 (SPATA20-004)
|
50547126-50555852 |
protein_coding |
ENST00000393244 (SPATA20-201)
|
50547201-50555850 |
protein_coding |
ENST00000502911 (SPATA20-010)
|
50547153-50549329 |
nonsense_mediated_decay |
ENST00000503063 (SPATA20-008)
|
50548013-50555852 |
retained_intron |
ENST00000503127 (SPATA20-003)
|
50547127-50555850 |
nonsense_mediated_decay |
ENST00000504265 (SPATA20-022)
|
50550108-50551384 |
retained_intron |
ENST00000504271 (SPATA20-012)
|
50550734-50551939 |
retained_intron |
ENST00000504334 (SPATA20-002)
|
50543058-50555850 |
nonsense_mediated_decay |
ENST00000505085 (SPATA20-009)
|
50547129-50548618 |
nonsense_mediated_decay |
ENST00000505336 (SPATA20-018)
|
50548060-50548814 |
retained_intron |
ENST00000505456 (SPATA20-014)
|
50547184-50549304 |
nonsense_mediated_decay |
ENST00000505559 (SPATA20-005)
|
50547205-50550891 |
nonsense_mediated_decay |
ENST00000505656 (SPATA20-021)
|
50548883-50550851 |
retained_intron |
ENST00000508528 (SPATA20-024)
|
50550272-50551985 |
nonsense_mediated_decay |
ENST00000508598 (SPATA20-015)
|
50547205-50548581 |
retained_intron |
ENST00000510917 (SPATA20-011)
|
50547161-50548863 |
nonsense_mediated_decay |
ENST00000511347 (SPATA20-020)
|
50548850-50551072 |
nonsense_mediated_decay |
ENST00000511605 (SPATA20-013)
|
50547180-50548172 |
retained_intron |
ENST00000511845 (SPATA20-017)
|
50547209-50548902 |
retained_intron |
ENST00000511937 (SPATA20-006)
|
50547999-50555852 |
processed_transcript |
ENST00000512181 (SPATA20-007)
|
50548019-50550802 |
retained_intron |
ENST00000512416 (SPATA20-019)
|
50548076-50549409 |
retained_intron |
ENST00000513618 (SPATA20-025)
|
50550400-50551108 |
retained_intron |
ENST00000515526 (SPATA20-016)
|
50547209-50548703 |
retained_intron |
ENST00000515619 (SPATA20-023)
|
50550212-50551669 |
retained_intron |
ENST00000619622 (SPATA20-202)
|
50547089-50555850 |
protein_coding |
ENSG00000015532 (XYLT2)
xylosyltransferase II
|
ENST00000017003 (XYLT2-001)
|
50346092-50361151 |
protein_coding |
ENST00000376550 (XYLT2-003)
|
50346136-50361151 |
nonsense_mediated_decay |
ENST00000507602 (XYLT2-002)
|
50346135-50363138 |
protein_coding |
ENST00000509778 (XYLT2-004)
|
50346131-50353674 |
protein_coding |
ENST00000511654 (XYLT2-005)
|
50356184-50358317 |
nonsense_mediated_decay |
ENST00000571021 (XYLT2-006)
|
50358978-50361151 |
retained_intron |
ENST00000574840 (XYLT2-007)
|
50357166-50358066 |
protein_coding |
ENSG00000049283 (EPN3)
epsin 3
|
ENST00000268933 (EPN3-001)
|
50532543-50543750 |
protein_coding |
ENST00000503246 (EPN3-008)
|
50532682-50537061 |
protein_coding |
ENST00000503690 (EPN3-009)
|
50532725-50536591 |
protein_coding |
ENST00000504857 (EPN3-014)
|
50532764-50536470 |
processed_transcript |
ENST00000507467 (EPN3-018)
|
50534558-50536964 |
protein_coding |
ENST00000507709 (EPN3-015)
|
50534492-50536726 |
protein_coding |
ENST00000507998 (EPN3-013)
|
50532738-50536754 |
processed_transcript |
ENST00000510045 (EPN3-002)
|
50532758-50542364 |
nonsense_mediated_decay |
ENST00000510462 (EPN3-011)
|
50532738-50536346 |
processed_transcript |
ENST00000511414 (EPN3-016)
|
50534552-50536803 |
processed_transcript |
ENST00000512291 (EPN3-005)
|
50532738-50541941 |
nonsense_mediated_decay |
ENST00000512379 (EPN3-004)
|
50532738-50542486 |
nonsense_mediated_decay |
ENST00000514874 (EPN3-010)
|
50532725-50536709 |
protein_coding |
ENST00000515028 (EPN3-012)
|
50532738-50536379 |
processed_transcript |
ENST00000515126 (EPN3-017)
|
50534555-50536882 |
protein_coding |
ENST00000537145 (EPN3-201)
|
50536427-50542496 |
protein_coding |
ENST00000571402 (EPN3-020)
|
50532738-50536536 |
processed_transcript |
ENST00000574464 (EPN3-019)
|
50536427-50542121 |
nonsense_mediated_decay |
ENSG00000064195 (DLX3)
distal-less homeobox 3
|
ENST00000434704 (DLX3-001)
|
49990005-49995224 |
protein_coding |
ENST00000512495 (DLX3-002)
|
49991335-49993703 |
protein_coding |
ENSG00000108813 (DLX4)
distal-less homeobox 4
|
ENST00000240306 (DLX4-001)
|
49969174-49974959 |
protein_coding |
ENST00000411890 (DLX4-003)
|
49972766-49974600 |
protein_coding |
ENST00000503276 (DLX4-002)
|
49971964-49973753 |
processed_transcript |
ENST00000503410 (DLX4-004)
|
49968970-49973191 |
processed_transcript |
ENST00000505318 (DLX4-005)
|
49969330-49972397 |
processed_transcript |
ENST00000611342 (DLX4-006)
|
49972939-49974600 |
protein_coding |
ENSG00000108819 (PPP1R9B)
protein phosphatase 1, regulatory subunit 9B
|
ENST00000513579 (PPP1R9B-003)
|
50139460-50145152 |
processed_transcript |
ENST00000612501 (PPP1R9B-001)
|
50133735-50150630 |
protein_coding |
ENSG00000108821 (COL1A1)
collagen, type I, alpha 1
|
ENST00000225964 (COL1A1-001)
|
50183289-50201632 |
protein_coding |
ENST00000463440 (COL1A1-005)
|
50193486-50194352 |
retained_intron |
ENST00000471344 (COL1A1-006)
|
50193550-50195665 |
retained_intron |
ENST00000474644 (COL1A1-002)
|
50199278-50201632 |
retained_intron |
ENST00000476387 (COL1A1-007)
|
50190909-50194058 |
retained_intron |
ENST00000485870 (COL1A1-004)
|
50196079-50196595 |
retained_intron |
ENST00000486572 (COL1A1-009)
|
50187607-50188554 |
retained_intron |
ENST00000494334 (COL1A1-008)
|
50190309-50190924 |
retained_intron |
ENST00000495677 (COL1A1-003)
|
50196520-50198702 |
retained_intron |
ENST00000504289 (COL1A1-014)
|
50191866-50192439 |
retained_intron |
ENST00000507689 (COL1A1-013)
|
50199289-50200191 |
protein_coding |
ENST00000510710 (COL1A1-018)
|
50185844-50187122 |
retained_intron |
ENST00000511732 (COL1A1-016)
|
50187892-50188784 |
retained_intron |
ENSG00000108823 (SGCA)
sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
|
ENST00000262018 (SGCA-001)
|
50166005-50175931 |
protein_coding |
ENST00000344627 (SGCA-002)
|
50166005-50175928 |
protein_coding |
ENST00000502555 (SGCA-004)
|
50166009-50169979 |
nonsense_mediated_decay |
ENST00000504073 (SGCA-011)
|
50168522-50175914 |
protein_coding |
ENST00000505964 (SGCA-012)
|
50175173-50175928 |
retained_intron |
ENST00000508382 (SGCA-013)
|
50172405-50175900 |
processed_transcript |
ENST00000511303 (SGCA-008)
|
50166045-50175928 |
protein_coding |
ENST00000512526 (SGCA-010)
|
50167581-50175387 |
nonsense_mediated_decay |
ENST00000513821 (SGCA-003)
|
50166004-50175797 |
nonsense_mediated_decay |
ENST00000513942 (SGCA-005)
|
50164214-50175850 |
processed_transcript |
ENST00000514934 (SGCA-006)
|
50165985-50168570 |
nonsense_mediated_decay |
ENSG00000108826 (MRPL27)
mitochondrial ribosomal protein L27
|
ENST00000225969 (MRPL27-001)
|
50367867-50373214 |
protein_coding |
ENST00000442592 (MRPL27-002)
|
50367868-50373207 |
protein_coding |
ENST00000503633 (MRPL27-003)
|
50367868-50373196 |
protein_coding |
ENST00000507088 (MRPL27-004)
|
50367857-50372960 |
protein_coding |
ENST00000508200 (MRPL27-007)
|
50367865-50370573 |
protein_coding |
ENST00000511860 (MRPL27-005)
|
50367888-50371163 |
protein_coding |
ENST00000514928 (MRPL27-006)
|
50370235-50373175 |
retained_intron |
ENSG00000108829 (LRRC59)
leucine rich repeat containing 59
|
ENST00000225972 (LRRC59-001)
|
50381238-50397553 |
protein_coding |
ENST00000503118 (LRRC59-003)
|
50375059-50385134 |
protein_coding |
ENST00000576448 (LRRC59-002)
|
50395974-50397504 |
protein_coding |
ENSG00000136444 (RSAD1)
radical S-adenosyl methionine domain containing 1
|
ENST00000258955 (RSAD1-001)
|
50478800-50485975 |
protein_coding |
ENST00000443328 (RSAD1-002)
|
50478860-50480629 |
retained_intron |
ENST00000504284 (RSAD1-004)
|
50478903-50484819 |
nonsense_mediated_decay |
ENST00000506211 (RSAD1-006)
|
50482097-50484998 |
nonsense_mediated_decay |
ENST00000509398 (RSAD1-007)
|
50482364-50483535 |
retained_intron |
ENST00000510554 (RSAD1-005)
|
50479048-50479918 |
protein_coding |
ENST00000513650 (RSAD1-008)
|
50484029-50484863 |
retained_intron |
ENST00000515221 (RSAD1-003)
|
50478860-50484897 |
nonsense_mediated_decay |
ENSG00000136449 (MYCBPAP)
MYCBP associated protein
|
ENST00000323776 (MYCBPAP-001)
|
50508384-50531497 |
protein_coding |
ENST00000419930 (MYCBPAP-004)
|
50508490-50510420 |
protein_coding |
ENST00000436259 (MYCBPAP-201)
|
50508384-50530239 |
protein_coding |
ENST00000437498 (MYCBPAP-002)
|
50508622-50531497 |
nonsense_mediated_decay |
ENST00000452039 (MYCBPAP-006)
|
50508541-50519089 |
protein_coding |
ENST00000458692 (MYCBPAP-005)
|
50508588-50518633 |
nonsense_mediated_decay |
ENST00000459754 (MYCBPAP-008)
|
50520994-50523052 |
retained_intron |
ENST00000468821 (MYCBPAP-007)
|
50519410-50520221 |
processed_transcript |
ENST00000470609 (MYCBPAP-003)
|
50508425-50522666 |
retained_intron |
ENST00000477744 (MYCBPAP-010)
|
50529178-50531500 |
nonsense_mediated_decay |
ENST00000485169 (MYCBPAP-009)
|
50525973-50528840 |
nonsense_mediated_decay |
ENST00000488432 (MYCBPAP-011)
|
50523720-50531501 |
protein_coding |
ENST00000573066 (MYCBPAP-012)
|
50530154-50531501 |
retained_intron |
ENST00000576179 (MYCBPAP-013)
|
50508449-50516093 |
protein_coding |
ENSG00000136457 (CHAD)
chondroadherin
|
ENST00000258969 (CHAD-002)
|
50464499-50468906 |
protein_coding |
ENST00000506187 (CHAD-005)
|
50464496-50465425 |
protein_coding |
ENST00000508540 (CHAD-001)
|
50464498-50468966 |
protein_coding |
ENSG00000167100 (SAMD14)
sterile alpha motif domain containing 14
|
ENST00000285206 (SAMD14-003)
|
50111309-50124162 |
protein_coding |
ENST00000330175 (SAMD14-001)
|
50110040-50129822 |
protein_coding |
ENST00000503131 (SAMD14-002)
|
50112671-50129882 |
protein_coding |
ENST00000503734 (SAMD14-008)
|
50116003-50123598 |
processed_transcript |
ENST00000507043 (SAMD14-006)
|
50118053-50129796 |
retained_intron |
ENST00000508892 (SAMD14-004)
|
50111336-50117799 |
retained_intron |
ENST00000511964 (SAMD14-007)
|
50124920-50129754 |
protein_coding |
ENST00000513474 (SAMD14-005)
|
50125117-50129814 |
processed_transcript |
ENST00000515816 (SAMD14-009)
|
50114228-50116287 |
retained_intron |
ENST00000573376 (SAMD14-010)
|
50112669-50115024 |
retained_intron |
ENSG00000167105 (TMEM92)
transmembrane protein 92
|
ENST00000300433 (TMEM92-001)
|
50271406-50281485 |
protein_coding |
ENST00000507382 (TMEM92-002)
|
50274427-50279326 |
protein_coding |
ENST00000511882 (TMEM92-003)
|
50274879-50279116 |
processed_transcript |
ENSG00000167107 (ACSF2)
acyl-CoA synthetase family member 2
|
ENST00000300441 (ACSF2-001)
|
50426158-50474835 |
protein_coding |
ENST00000427954 (ACSF2-002)
|
50426219-50474837 |
protein_coding |
ENST00000502667 (ACSF2-005)
|
50426252-50474831 |
protein_coding |
ENST00000503295 (ACSF2-024)
|
50472131-50473760 |
retained_intron |
ENST00000503387 (ACSF2-018)
|
50469906-50471523 |
retained_intron |
ENST00000503408 (ACSF2-008)
|
50426218-50461265 |
nonsense_mediated_decay |
ENST00000504392 (ACSF2-004)
|
50426218-50474670 |
protein_coding |
ENST00000504945 (ACSF2-009)
|
50426218-50461048 |
retained_intron |
ENST00000506052 (ACSF2-023)
|
50462239-50463041 |
retained_intron |
ENST00000506085 (ACSF2-007)
|
50468343-50474845 |
processed_transcript |
ENST00000506582 (ACSF2-010)
|
50426218-50462426 |
protein_coding |
ENST00000507769 (ACSF2-014)
|
50464281-50471400 |
retained_intron |
ENST00000507792 (ACSF2-022)
|
50473825-50474774 |
retained_intron |
ENST00000508245 (ACSF2-012)
|
50463480-50473932 |
nonsense_mediated_decay |
ENST00000508734 (ACSF2-017)
|
50468359-50471065 |
processed_transcript |
ENST00000509806 (ACSF2-015)
|
50464544-50473403 |
processed_transcript |
ENST00000510262 (ACSF2-013)
|
50463516-50472446 |
nonsense_mediated_decay |
ENST00000510410 (ACSF2-003)
|
50426158-50474670 |
nonsense_mediated_decay |
ENST00000511147 (ACSF2-021)
|
50472461-50474256 |
processed_transcript |
ENST00000511288 (ACSF2-006)
|
50468329-50471761 |
retained_intron |
ENST00000512119 (ACSF2-019)
|
50470063-50473963 |
processed_transcript |
ENST00000512537 (ACSF2-020)
|
50470931-50473790 |
retained_intron |
ENST00000513101 (ACSF2-011)
|
50462536-50471188 |
retained_intron |
ENST00000513544 (ACSF2-016)
|
50467840-50473901 |
processed_transcript |
ENST00000570356 (ACSF2-025)
|
50460663-50461411 |
retained_intron |
ENSG00000188662 (HILS1)
histone linker H1 domain, spermatid-specific 1, pseudogene
|
ENST00000504307 (HILS1-003)
|
50171428-50181178 |
processed_transcript |
ENST00000545329 (HILS1-001)
|
50171514-50171936 |
unitary_pseudogene |
ENSG00000206824 (Y_RNA)
Y RNA
|
ENST00000384097 (Y_RNA.1-638)
|
50386145-50386246 |
misc_RNA |
ENSG00000246640 (RP11-1094H24.4)
|
ENST00000499842 (RP11-1094H24.4-001)
|
50050349-50055739 |
lincRNA |
ENSG00000248172 (RP11-1094H24.3)
|
ENST00000511867 (RP11-1094H24.3-001)
|
49996889-50016844 |
lincRNA |
ENSG00000249406 (RP11-893F2.5)
|
ENST00000509943 (RP11-893F2.5-001)
|
50208972-50214459 |
lincRNA |
ENSG00000249451 (RP11-94C24.6)
|
ENST00000502300 (RP11-94C24.6-001)
|
50503412-50508328 |
lincRNA |
ENSG00000249838 (SUMO2P7)
SUMO2 pseudogene 7
|
ENST00000511179 (SUMO2P7-001)
|
50235845-50236129 |
processed_pseudogene |
ENSG00000250107 (CACNA1G-AS1)
CACNA1G antisense RNA 1
|
ENST00000505495 (CACNA1G-AS1-002)
|
50556604-50559450 |
antisense |
ENST00000505793 (CACNA1G-AS1-001)
|
50556207-50562108 |
antisense |
ENST00000508920 (CACNA1G-AS1-003)
|
50557174-50559410 |
antisense |
ENSG00000250282 (RP5-875H18.4)
|
ENST00000511361 (RP5-875H18.4-001)
|
50100704-50101920 |
antisense |
ENSG00000251085 (RP11-893F2.6)
|
ENST00000514468 (RP11-893F2.6-001)
|
50214694-50215420 |
lincRNA |
ENSG00000251179 (TMEM92-AS1)
TMEM92 antisense RNA 1
|
ENST00000508851 (TMEM92-AS1-001)
|
50281577-50287855 |
antisense |
ENSG00000253730 (RP11-893F2.13)
|
ENST00000523083 (RP11-893F2.13-001)
|
50158333-50161276 |
antisense |
ENSG00000261959 (RP11-893F2.14)
|
ENST00000572855 (RP11-893F2.14-001)
|
50163523-50165316 |
antisense |
ENSG00000262759 (MRPS21P9)
mitochondrial ribosomal protein S21 pseudogene 9
|
ENST00000571150 (MRPS21P9-001)
|
50450179-50450725 |
processed_pseudogene |
ENSG00000263176 (RP11-893F2.15)
|
ENST00000577175 (RP11-893F2.15-001)
|
50212933-50215357 |
lincRNA |
ENSG00000274668 (AC015909.1)
|
ENST00000610382 (AC015909.1-201)
|
50325345-50325442 |
miRNA |
ENSG00000275025 (RP5-875H18.10)
|
ENST00000620020 (RP5-875H18.10-001)
|
50098460-50098899 |
antisense |
ENSG00000275897 (RP11-94C24.13)
|
ENST00000620769 (RP11-94C24.13-001)
|
50475819-50478391 |
lincRNA |
ENSG00000276851 (RP5-875H18.9)
|
ENST00000612365 (RP5-875H18.9-001)
|
50094065-50094647 |
lincRNA |
ENSG00000279792 (RP11-893F2.18)
|
ENST00000624336 (RP11-893F2.18-001)
|
50362967-50365232 |
TEC |