C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136485 DCAF7 9606 + 17:63550461-63594266 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000415273 DCAF7-002 63550500-63589785 protein_coding
  ENST00000431926 DCAF7-004 63550482-63594266 protein_coding
  ENST00000580091 DCAF7-006 63589064-63594259 processed_transcript
  ENST00000582274 DCAF7-005 63550510-63552555 processed_transcript
  ENST00000614556 DCAF7-001 63550461-63594266 protein_coding
  ENST00000615512 DCAF7-007 63550547-63585251 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431926ENST00000614556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431926 9.392±0.00 12.651±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.188±0.00 N/A N/A 18.108±0.00
ENST00000614556 2.741±0.00 N/A 4.807±0.00 6.641±2.08 4.515±1.80 5.635±0.41 4.168±3.27 8.362±3.99 4.885±1.19 8.116±2.52 1.826±0.29 14.316±8.21 15.708±1.58 15.197±5.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZT CIL_0006ZT_0001 CGP 17:63523334-63594266
CIL_0002OB CIL_0002OB_0001 CGP 17:63550461-63608365

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016363 IDA nuclear matrix
GO:0016567 IEA protein ubiquitination
GO:0043234 IDA protein complex
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054355 dcaf7 ddb1 and cul4 associated factor 7 protein_coding Danio_rerio
ENSMUSG00000049354 Dcaf7 DDB1 and CUL4 associated factor 7 protein_coding Mus_musculus

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