C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614556 DCAF7-001 ENSG00000136485 9606 + 17:63550461-63594266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000614556
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000614556 2.741±0.00 4.807±0.00 6.641±2.08 4.515±1.80 5.635±0.41 4.168±3.27 8.362±3.99 4.885±1.19 8.116±2.52 1.826±0.29 14.316±8.21 15.708±1.58 15.197±5.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZT CIL_0006ZT_0001 CGP 17:63523334-63594266
CIL_0002OB CIL_0002OB_0001 CGP 17:63550461-63608365

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016363 IDA nuclear matrix
GO:0016567 IEA protein ubiquitination
GO:0043234 IDA protein complex
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058438 Dcaf7-001 protein_coding Mus_musculus 0 1927
ENSDART00000058221 dcaf7-001 protein_coding Danio_rerio 0 928
ENSMUST00000106891 Dcaf7-002 retained_intron Mus_musculus 0 837
ENSDART00000135046 dcaf7-002 retained_intron Danio_rerio 0 305

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