C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049354 Dcaf7 10090 + 11:106036872-106059324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058438 Dcaf7-001 106036872-106059324 protein_coding
  ENSMUST00000106891 Dcaf7-002 106036900-106048644 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058438ENSMUST00000106891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058438 17.325±6.95 21.739±1.41 18.391±0.85 47.222±16.56 22.196±4.37 19.362±3.63 13.876±0.61 18.288±0.72 12.111±2.93 29.462±2.56 7.364±0.27 29.541±7.73 14.855±4.07 29.234±11.51
ENSMUST00000106891 N/A 49.240±3.01 N/A N/A 15.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839
CIL_0006ZT CIL_0006ZT_0002 CGP 11:106008124-106059324
CIL_0002OB CIL_0002OB_0002 CGP 11:106036872-106073612

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016363 ISS nuclear matrix
GO:0016567 IEA protein ubiquitination
GO:0043234 ISS protein complex
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054355 dcaf7 ddb1 and cul4 associated factor 7 protein_coding Danio_rerio
ENSG00000136485 DCAF7 DDB1 and CUL4 associated factor 7 protein_coding Homo_sapiens

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