C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cap methyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137200 CMTR1 9606 + 6:37433219-37482827 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373451 CMTR1-001 37433220-37481506 protein_coding
  ENST00000455891 CMTR1-002 37433220-37462061 protein_coding
  ENST00000457419 CMTR1-007 37475319-37482827 protein_coding
  ENST00000471097 CMTR1-009 37433219-37444083 processed_transcript
  ENST00000475364 CMTR1-004 37473568-37479195 nonsense_mediated_decay
  ENST00000493656 CMTR1-003 37459659-37462072 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373451ENST00000455891ENST00000475364
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373451 8.104±0.00 10.927±0.00 0.337±0.00 7.996±4.55 4.863±3.43 4.693±3.02 4.660±3.37 9.603±0.00 3.451±2.02 3.991±1.98 5.280±3.41 8.339±3.89 13.394±2.67 26.647±5.69
ENST00000455891 N/A N/A N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475364 N/A N/A N/A N/A N/A 1.465±0.00 N/A N/A N/A N/A N/A N/A N/A 18.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z5 CIL_0001Z5_0001 CGP 6:37353972-37482827
CIL_0001Z6 CIL_0001Z6_0001 CGP 6:37433219-37499922

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004483 IDA mRNA (nucleoside-2'-O-)-methyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006370 IMP 7-methylguanosine mRNA capping
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0080009 IDA mRNA methylation
GO:0097309 IDA cap1 mRNA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030830 cmtr1 cap methyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000024019 Cmtr1 cap methyltransferase 1 protein_coding Mus_musculus

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