C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkB, alkylation repair homolog 8 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137760 ALKBH8 9606 - 11:107502726-107565746 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260318 ALKBH8-004 107504598-107565701 nonsense_mediated_decay
  ENST00000389568 ALKBH8-002 107504595-107565518 protein_coding
  ENST00000393100 ALKBH8-006 107532314-107565734 nonsense_mediated_decay
  ENST00000417449 ALKBH8-005 107504658-107565742 protein_coding
  ENST00000428149 ALKBH8-001 107502726-107565746 protein_coding
  ENST00000429370 ALKBH8-003 107503029-107565735 protein_coding
  ENST00000530933 ALKBH8-007 107553857-107565733 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260318ENST00000393100ENST00000417449ENST00000428149ENST00000429370ENST00000530933
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260318 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A N/A N/A
ENST00000393100 N/A N/A N/A 0.807±0.00 N/A N/A N/A N/A N/A N/A 0.737±0.00 N/A N/A
ENST00000417449 0.356±0.00 0.579±0.00 N/A 0.861±0.00 0.258±0.00 N/A N/A 0.823±0.00 0.321±0.14 N/A 1.350±0.00 0.847±0.00 N/A
ENST00000428149 N/A 0.124±0.00 0.530±0.00 0.482±0.18 0.585±0.00 0.488±0.20 0.568±0.00 N/A 0.632±0.00 0.823±0.22 0.757±0.31 0.687±0.37 1.164±0.55
ENST00000429370 N/A 0.228±0.00 N/A N/A N/A N/A 0.312±0.00 N/A 0.368±0.00 N/A 0.370±0.00 0.152±0.00 N/A
ENST00000530933 N/A N/A N/A N/A N/A 0.728±0.00 N/A N/A 1.652±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0016300 IDA tRNA (uracil) methyltransferase activity
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030488 IDA tRNA methylation
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060256 alkbh8 alkB, alkylation repair homolog 8 (E. coli) protein_coding Danio_rerio
ENSMUSG00000025899 Alkbh8 alkB, alkylation repair homolog 8 (E. coli) protein_coding Mus_musculus

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