C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkB, alkylation repair homolog 8 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025899 Alkbh8 10090 + 9:3335478-3387050 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053407 Alkbh8-201 3335478-3387050 protein_coding
  ENSMUST00000165105 Alkbh8-202 3338445-3385842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053407ENSMUST00000165105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053407 0.542±0.22 0.249±0.01 0.567±0.00 2.606±0.00 0.234±0.08 0.314±0.14 0.353±0.24 0.524±0.18 1.691±1.90 0.517±0.34 0.601±0.17 0.952±0.54 1.851±0.77 0.687±0.18
ENSMUST00000165105 0.720±0.32 0.768±0.25 N/A N/A 0.730±0.35 0.632±0.21 0.272±0.09 0.796±0.26 0.563±0.21 0.616±0.14 0.564±0.00 1.689±0.64 1.258±0.47 0.660±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005829 ISS cytosol
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0016300 ISS tRNA (uracil) methyltransferase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030488 ISS tRNA methylation
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060256 alkbh8 alkB, alkylation repair homolog 8 (E. coli) protein_coding Danio_rerio
ENSG00000137760 ALKBH8 alkB, alkylation repair homolog 8 (E. coli) protein_coding Homo_sapiens

Loading