C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin binding protein 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137942 FNBP1L 9606 + 1:93448131-93554661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260506 FNBP1L-201 93448131-93554659 protein_coding
  ENST00000271234 FNBP1L-202 93448131-93554659 protein_coding
  ENST00000370253 FNBP1L-001 93448282-93554661 protein_coding
  ENST00000424449 FNBP1L-003 93529710-93552579 protein_coding
  ENST00000603526 FNBP1L-004 93543826-93549314 retained_intron
  ENST00000604705 FNBP1L-002 93448282-93551125 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260506ENST00000271234ENST00000370253ENST00000424449ENST00000604705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260506 2.380±0.00 0.659±0.00 7.942±0.00 0.898±0.57 3.871±0.65 4.152±0.00 1.362±0.33 4.541±2.18 1.862±1.45 5.303±2.03 1.479±0.78 2.758±1.52 2.743±1.24 3.809±1.19
ENST00000271234 N/A N/A N/A N/A N/A N/A 1.245±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000370253 9.596±0.00 3.302±0.00 N/A 0.970±0.24 2.511±0.84 6.385±0.00 3.545±2.08 11.015±0.00 1.305±0.09 4.194±1.49 2.791±2.20 4.410±1.32 2.927±0.32 4.795±0.99
ENST00000424449 N/A N/A N/A 1.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604705 N/A N/A N/A N/A N/A N/A 0.707±0.00 1.170±0.00 1.866±0.00 N/A N/A 2.174±0.00 3.388±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C6 CIL_0007C6_0002 CGP 1:93448131-93847150

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006900 IDA membrane budding
GO:0006914 IEA autophagy
GO:0007165 IEA signal transduction
GO:0008289 IEA lipid binding
GO:0010324 IDA membrane invagination
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016050 IDA vesicle organization
GO:0030050 IDA vesicle transport along actin filament
GO:0051491 IDA positive regulation of filopodium assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0072583 IDA clathrin-mediated endocytosis
GO:0097320 IDA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020131 fnbp1l formin binding protein 1-like protein_coding Danio_rerio
ENSMUSG00000039735 Fnbp1l formin binding protein 1-like protein_coding Mus_musculus

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