C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin binding protein 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260506 FNBP1L-201 ENSG00000137942 9606 + 1:93448131-93554659 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260506 2.380±0.00 0.659±0.00 7.942±0.00 0.898±0.57 3.871±0.65 4.152±0.00 1.362±0.33 4.541±2.18 1.862±1.45 5.303±2.03 1.479±0.78 2.758±1.52 2.743±1.24 3.809±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C6 CIL_0007C6_0002 CGP 1:93448131-93847150

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006900 IDA membrane budding
GO:0006914 IEA autophagy
GO:0007165 IEA signal transduction
GO:0008289 IEA lipid binding
GO:0010324 IDA membrane invagination
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016050 IDA vesicle organization
GO:0030050 IDA vesicle transport along actin filament
GO:0051491 IDA positive regulation of filopodium assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0072583 IDA clathrin-mediated endocytosis
GO:0097320 IDA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162409 Fnbp1l-001 protein_coding Mus_musculus 0 2507
ENSMUST00000162947 Fnbp1l-002 protein_coding Mus_musculus 0 1424
ENSMUST00000162884 Fnbp1l-003 retained_intron Mus_musculus 0 490

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