C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholesterol 25-hydroxylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138135 CH25H 9606 - 10:89205629-89207314 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371852 CH25H-001 89205629-89207314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371852
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371852 2.125±0.00 3.420±0.00 1.506±0.17 1.038±0.07 1.251±1.05 0.258±0.18 0.118±0.00 0.177±0.08 9.322±9.06 0.857±0.00 1.083±0.86 0.720±0.49 0.444±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IV CIL_0001IV_0001 CGP 10:88990531-89207314
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001567 IEA cholesterol 25-hydroxylase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006629 TAS lipid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006699 TAS bile acid biosynthetic process
GO:0008203 IEA cholesterol metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0008395 TAS steroid hydroxylase activity
GO:0016021 IEA integral component of membrane
GO:0016126 IEA sterol biosynthetic process
GO:0016491 IEA oxidoreductase activity
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045190 ch25h cholesterol 25-hydroxylase protein_coding Danio_rerio
ENSMUSG00000050370 Ch25h cholesterol 25-hydroxylase protein_coding Mus_musculus

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