C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138135-ENSG00000107798 CGP 9606 10:89205629-89414557
GeneTranscriptPositionBiotype
ENSG00000107798 (LIPA)
lipase A, lysosomal acid, cholesterol esterase 		ENST00000282673 (LIPA-005) 89225109-89342704 protein_coding
ENST00000336233 (LIPA-001) 89213569-89252058 protein_coding
ENST00000371837 (LIPA-004) 89213569-89414557 protein_coding
ENST00000428800 (LIPA-002) 89222533-89247831 protein_coding
ENST00000456827 (LIPA-201) 89213575-89252039 protein_coding
ENST00000463623 (LIPA-007) 89291991-89342610 processed_transcript
ENST00000487618 (LIPA-006) 89277924-89342674 processed_transcript
ENST00000489359 (LIPA-008) 89335336-89342659 processed_transcript
ENSG00000119917 (IFIT3)
interferon-induced protein with tetratricopeptide repeats 3 		ENST00000371811 (IFIT3-002) 89332484-89340971 protein_coding
ENST00000371818 (IFIT3-001) 89327894-89340971 protein_coding
ENSG00000119922 (IFIT2)
interferon-induced protein with tetratricopeptide repeats 2 		ENST00000371826 (IFIT2-001) 89301955-89309276 protein_coding
ENST00000611722 (IFIT2-201) 89302046-89308919 protein_coding
ENSG00000138135 (CH25H)
cholesterol 25-hydroxylase 		ENST00000371852 (CH25H-001) 89205629-89207314 protein_coding
ENSG00000185745 (IFIT1)
interferon-induced protein with tetratricopeptide repeats 1 		ENST00000371804 (IFIT1-001) 89392546-89403988 protein_coding
ENST00000546318 (IFIT1-201) 89392546-89406486 protein_coding
ENSG00000204010 (IFIT1B)
interferon-induced protein with tetratricopeptide repeats 1B 		ENST00000371809 (IFIT1B-001) 89378056-89385205 protein_coding
ENSG00000224289 (IFIT6P)
interferon-induced protein with tetratricopeptide repeats 6, pseudogene 		ENST00000418257 (IFIT6P-001) 89362294-89363487 unprocessed_pseudogene
ENSG00000266769 (AL353751.1)
 ENST00000584824 (AL353751.1-201) 89264340-89264406 miRNA
CIL_0001IW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050370-ENSMUSG00000024781 CGP 10090 19:34473786-34527474
GeneTranscriptPositionBiotype
ENSMUSG00000024781 (Lipa)
lysosomal acid lipase A 		ENSMUST00000049572 (Lipa-201) 34492318-34527474 protein_coding
ENSMUST00000178114 (Lipa-202) 34492318-34527474 protein_coding
ENSMUSG00000050370 (Ch25h)
cholesterol 25-hydroxylase 		ENSMUST00000050562 (Ch25h-201) 34473786-34475135 protein_coding
ENSMUSG00000097558 (Gm26902)
predicted gene, 26902 		ENSMUST00000181307 (Gm26902-201) 34474833-34481546 lincRNA
ENSMUST00000181777 (Gm26902-202) 34474808-34476618 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IW_0001ENSG00000107798ENST00000282673ENST00000336233ENST00000371837ENST00000428800ENST00000456827ENST00000463623ENST00000487618ENST00000489359ENSG00000119917ENST00000371811ENST00000371818ENSG00000119922ENST00000371826ENST00000611722ENSG00000138135ENST00000371852ENSG00000185745ENST00000371804ENST00000546318ENSG00000204010ENST00000371809ENSG00000224289ENST00000418257ENSG00000266769ENST00000584824CIL_0001IW_0002ENSMUSG00000024781ENSMUST00000049572ENSMUST00000178114ENSMUSG00000050370ENSMUST00000050562ENSMUSG00000097558ENSMUST00000181307ENSMUST00000181777
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IW_0001ENSG00000107798ENST00000282673ENST00000336233ENST00000371837ENST00000428800ENST00000456827ENST00000489359ENSG00000119917ENST00000371811ENST00000371818ENSG00000119922ENST00000371826ENST00000611722ENSG00000138135ENST00000371852ENSG00000185745ENST00000371804ENST00000546318ENSG00000204010ENST00000371809ENSG00000224289ENST00000418257ENSG00000266769ENST00000584824CIL_0001IW_0002ENSMUSG00000024781ENSMUST00000049572ENSMUST00000178114ENSMUSG00000050370ENSMUST00000050562ENSMUSG00000097558ENSMUST00000181307ENSMUST00000181777
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107798 ENST00000282673 N/A N/A N/A N/A 4.894±0.00 N/A N/A N/A 2.901±0.00 17.555±0.00 0.695±0.00 3.040±0.00 N/A N/A
ENST00000336233 55.588±0.00 13.493±0.00 3.983±0.00 7.770±5.58 16.711±12.43 11.274±7.76 4.701±3.15 11.396±4.66 4.653±1.88 13.988±2.30 2.931±0.00 8.677±5.27 11.391±4.40 4.377±2.12
ENST00000371837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 1.064±0.00 N/A 1.589±0.97
ENST00000428800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.490±0.00 N/A
ENST00000456827 20.513±0.00 24.858±0.00 N/A 6.334±0.00 22.534±0.00 13.089±0.00 2.157±0.00 7.270±0.00 7.881±0.00 10.723±0.00 N/A 3.641±0.00 6.305±0.00 4.313±0.00
ENST00000463623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489359 N/A N/A N/A 14.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119917 ENST00000371811 0.941±0.00 5.893±0.00 1.328±0.00 2.407±1.16 5.103±0.22 0.836±0.34 1.934±1.07 0.405±0.00 N/A 12.390±5.55 1.684±0.38 2.016±0.47 6.638±1.41 2.344±0.88
ENST00000371818 6.650±0.00 2.276±0.00 0.280±0.00 2.222±1.09 4.060±2.11 2.173±1.34 0.880±0.10 4.333±1.42 1.193±0.52 2.597±0.57 N/A 2.457±1.29 10.906±7.66 2.741±1.44
ENSG00000119922 ENST00000371826 N/A 0.505±0.00 N/A 0.618±0.23 N/A N/A N/A N/A 0.153±0.04 1.542±0.58 N/A 0.707±0.22 N/A 0.318±0.00
ENST00000611722 2.219±0.00 2.459±0.00 1.915±0.00 2.044±0.82 3.488±1.50 1.324±0.44 1.179±0.31 3.556±0.14 1.032±0.21 4.447±1.30 0.437±0.37 1.867±0.78 5.683±1.13 1.746±1.18
ENSG00000138135 ENST00000371852 2.125±0.00 3.420±0.00 N/A 1.506±0.17 1.038±0.07 1.251±1.05 0.258±0.18 0.118±0.00 0.177±0.08 9.322±9.06 0.857±0.00 1.083±0.86 0.720±0.49 0.444±0.39
ENSG00000185745 ENST00000371804 1.731±0.00 2.863±0.00 1.837±0.00 4.751±2.76 5.349±0.45 5.046±3.04 4.985±2.77 5.892±0.74 2.406±0.87 7.155±0.00 1.242±0.11 3.801±1.40 7.730±1.65 2.925±0.01
ENST00000546318 0.083±0.00 N/A N/A 0.521±0.00 N/A 0.369±0.00 0.423±0.00 N/A N/A N/A N/A 0.227±0.04 N/A 0.322±0.00
ENSG00000204010 ENST00000371809 0.041±0.00 N/A 0.169±0.00 0.061±0.00 0.032±0.00 0.105±0.08 0.006±0.00 0.098±0.06 0.113±0.00 0.620±0.51 0.118±0.00 0.016±0.01 0.653±0.58 0.011±0.00
ENSG00000224289 ENST00000418257 N/A 0.021±0.00 0.203±0.00 0.011±0.00 N/A N/A N/A 0.154±0.04 0.062±0.00 N/A N/A 0.028±0.00 N/A 0.009±0.00
ENSG00000266769 ENST00000584824 N/A N/A N/A 0.690±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024781 ENSMUST00000049572 26.109±2.50 68.356±13.50 14.354±0.66 5.039±2.47 28.057±4.65 14.384±3.35 9.449±0.72 119.956±7.60 65.287±39.38 31.348±1.82 1.560±0.51 21.270±4.86 10.880±6.78 1.708±0.75
ENSMUST00000178114 3.328±0.23 9.867±2.65 1.896±0.01 0.505±0.20 4.363±1.11 N/A 1.189±0.00 14.996±0.60 8.456±4.81 3.958±0.14 0.721±0.19 4.138±0.00 2.424±1.43 0.221±0.00
ENSMUSG00000050370 ENSMUST00000050562 2.622±1.55 2.477±0.72 2.479±0.05 0.314±0.15 6.833±3.30 4.498±0.53 0.960±0.20 3.678±0.70 0.118±0.07 7.776±4.62 0.152±0.07 6.594±2.49 0.319±0.17 1.576±2.11
ENSMUSG00000097558 ENSMUST00000181307 N/A N/A 0.263±0.06 0.077±0.00 N/A N/A N/A N/A 0.008±0.00 N/A 0.017±0.01 0.149±0.08 0.050±0.03 0.372±0.00
ENSMUST00000181777 N/A N/A N/A N/A 0.070±0.00 N/A 0.151±0.06 N/A 0.034±0.00 N/A 0.065±0.03 N/A 0.065±0.00 0.025±0.00

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