C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138175 ARL3 9606 - 10:102673731-102714407 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260746 ARL3-001 102673731-102714407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260746
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260746 5.864±0.00 3.899±0.00 0.894±0.00 12.214±6.84 2.526±1.52 6.224±5.29 3.220±2.75 5.307±4.84 1.650±0.05 4.749±3.87 1.292±1.18 8.289±5.97 5.119±2.44 20.167±4.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0001 VISTA 10:102469546-103070739
CIL_0001HP CIL_0001HP_0002 CGP 10:102644496-102714407
CIL_0001HQ CIL_0001HQ_0002 CGP 10:102673731-102743492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 IMP cytokinesis
GO:0001822 ISS kidney development
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005876 IDA spindle microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006892 IMP post-Golgi vesicle-mediated transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007224 IEA smoothened signaling pathway
GO:0007264 IDA:IEA small GTPase mediated signal transduction
GO:0008017 IDA microtubule binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019003 IDA GDP binding
GO:0030496 IDA midbody
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0032391 IDA photoreceptor connecting cilium
GO:0042073 IEA intraciliary transport
GO:0042461 ISS photoreceptor cell development
GO:0046872 IEA metal ion binding
GO:0060271 IMP cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056794 npm3 nucleophosmin/nucleoplasmin, 3 protein_coding Danio_rerio
ENSDARG00000071409 arl3 ADP-ribosylation factor-like 3 protein_coding Danio_rerio
ENSMUSG00000025035 Arl3 ADP-ribosylation factor-like 3 protein_coding Mus_musculus

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