C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001HP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060729-ENSDARG00000071409 CGP 7955 12:35413175-35469034
GeneTranscriptPositionBiotype
ENSDARG00000060729 (trim8b)
tripartite motif-containing 8b 		ENSDART00000085888 (trim8b-001) 35415738-35431758 protein_coding
ENSDART00000149292 (trim8b-002) 35413175-35427519 protein_coding
ENSDARG00000071409 (arl3)
ADP-ribosylation factor-like 3 		ENSDART00000105545 (arl3-001) 35462650-35469034 protein_coding
CIL_0001HP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171206-ENSG00000138175 CGP 9606 10:102644496-102714407
GeneTranscriptPositionBiotype
ENSG00000138175 (ARL3)
ADP-ribosylation factor-like 3 		ENST00000260746 (ARL3-001) 102673731-102714407 protein_coding
ENSG00000171206 (TRIM8)
tripartite motif containing 8 		ENST00000302424 (TRIM8-001) 102644496-102658407 protein_coding
ENST00000462202 (TRIM8-003) 102644887-102656954 protein_coding
ENST00000479004 (TRIM8-004) 102655281-102657087 processed_transcript
ENST00000487927 (TRIM8-002) 102649219-102656969 processed_transcript
CIL_0001HP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025034-ENSMUSG00000025035 CGP 10090 19:46501648-46573085
GeneTranscriptPositionBiotype
ENSMUSG00000025034 (Trim8)
tripartite motif-containing 8 		ENSMUST00000026008 (Trim8-201) 46501648-46516444 protein_coding
ENSMUSG00000025035 (Arl3)
ADP-ribosylation factor-like 3 		ENSMUST00000026009 (Arl3-201) 46531109-46573085 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HP_0001ENSDARG00000060729ENSDART00000085888ENSDART00000149292ENSDARG00000071409ENSDART00000105545CIL_0001HP_0002ENSG00000138175ENST00000260746ENSG00000171206ENST00000302424ENST00000462202ENST00000479004ENST00000487927CIL_0001HP_0003ENSMUSG00000025034ENSMUST00000026008ENSMUSG00000025035ENSMUST00000026009
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HP_0001ENSDARG00000060729ENSDART00000085888ENSDARG00000071409ENSDART00000105545CIL_0001HP_0002ENSG00000138175ENST00000260746ENSG00000171206ENST00000302424ENST00000462202ENST00000487927CIL_0001HP_0003ENSMUSG00000025034ENSMUST00000026008ENSMUSG00000025035ENSMUST00000026009
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060729 ENSDART00000085888 N/A N/A N/A 13.680±5.32 N/A N/A 7.214±2.03 6.842±2.55 1.004±0.00 N/A 2.878±0.00 N/A N/A N/A
ENSDART00000149292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071409 ENSDART00000105545 N/A N/A N/A 39.171±4.05 N/A N/A 13.292±7.09 8.315±2.78 0.257±0.00 N/A 2.684±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138175 ENST00000260746 5.864±0.00 3.899±0.00 0.894±0.00 12.214±6.84 2.526±1.52 6.224±5.29 3.220±2.75 5.307±4.84 1.650±0.05 4.749±3.87 1.292±1.18 8.289±5.97 5.119±2.44 20.167±4.96
ENSG00000171206 ENST00000302424 48.720±0.00 18.703±0.00 7.042±0.00 16.235±8.27 38.791±30.80 14.057±10.32 11.228±9.60 16.160±10.73 7.642±2.89 30.962±28.17 13.471±7.52 26.374±17.05 26.626±9.80 18.420±0.83
ENST00000462202 N/A 25.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487927 42.611±0.00 N/A N/A N/A 81.467±0.00 24.962±0.00 N/A N/A N/A N/A N/A N/A 12.953±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025034 ENSMUST00000026008 18.651±2.21 19.939±9.80 10.005±2.89 23.455±12.67 20.276±9.73 21.847±2.80 7.457±1.12 17.129±2.57 7.216±2.39 46.263±5.35 7.719±0.39 33.953±12.91 19.513±8.27 1.121±0.28
ENSMUSG00000025035 ENSMUST00000026009 19.471±1.21 10.056±0.66 33.563±2.70 108.409±75.70 9.179±3.38 5.133±0.92 7.602±1.38 28.604±4.83 15.838±8.82 16.833±1.30 12.813±1.60 27.215±28.37 20.937±8.01 184.826±73.34

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