C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138442 WDR12 9606 - 2:202874782-203014798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261015 WDR12-001 202874782-202912226 protein_coding
  ENST00000463824 WDR12-004 202883589-202884535 retained_intron
  ENST00000464820 WDR12-006 202883473-202884240 retained_intron
  ENST00000467777 WDR12-005 202880601-202882855 retained_intron
  ENST00000475611 WDR12-007 202884238-202894765 retained_intron
  ENST00000477723 WDR12-009 202899557-203014798 processed_transcript
  ENST00000477727 WDR12-008 202884141-202892674 retained_intron
  ENST00000478869 WDR12-003 202895998-202901120 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261015ENST00000467777ENST00000478869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261015 1.710±0.00 1.036±0.00 0.403±0.00 1.367±0.25 1.352±0.79 0.690±0.12 0.505±0.00 1.253±0.00 0.772±0.08 0.669±0.06 1.306±0.00 1.931±0.90 1.102±0.51 1.679±0.00
ENST00000467777 N/A N/A N/A N/A N/A 3.613±0.00 N/A 8.165±0.00 N/A N/A N/A 18.453±11.20 5.601±0.00 N/A
ENST00000478869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.096±0.00 25.907±18.45 18.853±0.00 26.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020R CIL_00020R_0001 CGP 2:202773150-203014798
CIL_00020W CIL_00020W_0001 CGP 2:202874782-203014798

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000463 IMP maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 IMP maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0007219 IEA Notch signaling pathway
GO:0008283 IMP cell proliferation
GO:0030687 IDA preribosome, large subunit precursor
GO:0042273 IC ribosomal large subunit biogenesis
GO:0043021 IEA ribonucleoprotein complex binding
GO:0070545 IDA PeBoW complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003287 wdr12 WD repeat domain 12 protein_coding Danio_rerio
ENSMUSG00000026019 Wdr12 WD repeat domain 12 protein_coding Mus_musculus

Loading