C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomodulin 3 (ubiquitous)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308580 TMOD3-001 ENSG00000138594 9606 + 15:51829630-51915725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308580
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308580 6.046±0.00 4.854±0.00 0.581±0.00 3.117±0.99 4.803±2.03 1.155±0.41 4.464±3.11 2.512±0.12 8.285±4.94 0.352±0.16 3.594±0.86 3.818±1.71 4.373±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IEA tropomyosin binding
GO:0005865 IEA striated muscle thin filament
GO:0030036 IEA actin cytoskeleton organization
GO:0048821 IEA erythrocyte development
GO:0051694 IEA pointed-end actin filament capping
GO:1901992 IEA positive regulation of mitotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072232 Tmod3-201 protein_coding Mus_musculus 0 1325
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00001 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00004 57
ENSMUST00000048099 Tmem194-001 protein_coding Mus_musculus 0.0005 53

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