C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1 associated regulatory protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138660 AP1AR 9606 + 4:112231737-112270047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274000 AP1AR-001 112231737-112270047 protein_coding
  ENST00000309703 AP1AR-002 112231833-112269677 protein_coding
  ENST00000502954 AP1AR-004 112231825-112254894 retained_intron
  ENST00000506522 AP1AR-005 112231889-112253311 retained_intron
  ENST00000510527 AP1AR-003 112231740-112265319 retained_intron
  ENST00000512741 AP1AR-006 112265052-112266830 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274000ENST00000309703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274000 3.178±0.00 2.424±0.00 2.830±0.00 3.266±0.42 3.562±1.15 3.861±0.13 1.281±0.47 4.866±2.42 1.974±0.44 2.433±1.84 1.293±0.00 5.484±1.33 2.041±0.85 6.805±1.63
ENST00000309703 N/A 0.517±0.00 N/A 4.774±1.95 1.014±0.24 3.999±0.00 0.883±0.08 2.560±0.00 2.893±0.00 1.840±0.00 0.711±0.00 2.221±0.00 0.601±0.21 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_00080F CIL_00080F_0001 VISTA 4:111826456-112428336
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001920 IMP negative regulation of receptor recycling
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005794 IDA Golgi apparatus
GO:0015031 IEA protein transport
GO:0019894 IDA kinesin binding
GO:0030133 IDA transport vesicle
GO:0034315 IEA regulation of Arp2/3 complex-mediated actin nucleation
GO:0034613 IEA cellular protein localization
GO:0035650 IDA AP-1 adaptor complex binding
GO:0048203 IDA vesicle targeting, trans-Golgi to endosome
GO:1900025 IMP negative regulation of substrate adhesion-dependent cell spreading
GO:2000146 IEA negative regulation of cell motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031496 CABZ01003022.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000074238 Ap1ar adaptor-related protein complex 1 associated regulatory protein protein_coding Mus_musculus

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