C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC24 family member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138802 SEC24B 9606 + 4:109433772-109540896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265175 SEC24B-001 109433815-109540896 protein_coding
  ENST00000399100 SEC24B-002 109433813-109539696 protein_coding
  ENST00000504968 SEC24B-003 109433772-109539746 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265175ENST00000399100ENST00000504968
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265175 1.600±0.00 N/A 1.836±0.38 1.253±0.34 N/A N/A 5.557±0.00 1.379±0.36 2.432±1.59 N/A 3.601±1.51 1.437±0.44 1.962±0.00
ENST00000399100 N/A N/A 2.315±0.00 N/A 2.938±0.00 2.496±0.00 5.625±0.00 N/A 4.766±0.00 1.969±0.00 3.900±0.55 N/A N/A
ENST00000504968 N/A 1.622±0.00 1.485±0.00 N/A 1.152±0.00 N/A N/A N/A N/A 3.212±0.00 3.105±0.00 N/A 3.317±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001843 IEA neural tube closure
GO:0002093 IEA auditory receptor cell morphogenesis
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0003151 IEA outflow tract morphogenesis
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 TAS:IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 TAS membrane
GO:0016192 TAS vesicle-mediated transport
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021747 IEA cochlear nucleus development
GO:0030127 IEA COPII vesicle coat
GO:0030134 IEA ER to Golgi transport vesicle
GO:0035909 IEA aorta morphogenesis
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0060088 IEA auditory receptor cell stereocilium organization
GO:0060425 IEA lung morphogenesis
GO:0060463 IEA lung lobe morphogenesis
GO:0060982 IEA coronary artery morphogenesis
GO:0061024 TAS membrane organization
GO:0061156 IEA pulmonary artery morphogenesis
GO:0072358 IEA cardiovascular system development
GO:0090178 IEA regulation of establishment of planar polarity involved in neural tube closure
GO:1901301 IEA regulation of cargo loading into COPII-coated vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071906 SEC24B SEC24 family member B protein_coding Danio_rerio
ENSMUSG00000001052 Sec24b Sec24 related gene family, member B (S. cerevisiae) protein_coding Mus_musculus

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