Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	solute carrier family 38, member 4
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000139209	SLC38A4	9606	-	12:46764761-46832408	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000266579		SLC38A4-002	46766016-46825997	protein_coding
	ENST00000447411		SLC38A4-001	46764761-46825997	protein_coding
	ENST00000546940		SLC38A4-003	46779949-46832408	protein_coding
	ENST00000547477		SLC38A4-004	46779780-46825985	protein_coding
	ENST00000550670		SLC38A4-005	46766303-46769304	protein_coding

Expression Patterns

Transcript ID	Adipose	Brain	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000266579	0.032±0.00	0.120±0.00	0.411±0.00	N/A	29.386±0.00	N/A	0.090±0.00	0.499±0.00	0.043±0.00	0.174±0.00	0.022±0.00
ENST00000447411	0.035±0.00	0.032±0.01	0.170±0.00	0.179±0.00	0.748±0.00	30.822±30.74	N/A	8.733±0.00	0.317±0.00	0.256±0.18	N/A
ENST00000546940	N/A	N/A	N/A	N/A	N/A	0.617±0.00	N/A	N/A	N/A	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0005YP	CIL_0005YP_0001	CGP	12:46764761-47079951

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003333	IEA	amino acid transmembrane transport
GO:0005886	TAS	plasma membrane
GO:0006811	TAS	ion transport
GO:0006814	IEA	sodium ion transport
GO:0006865	TAS	amino acid transport
GO:0015171	IEA	amino acid transmembrane transporter activity
GO:0015293	IEA	symporter activity
GO:0016021	IEA	integral component of membrane
GO:0055085	TAS	transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000018149	slc38a4	solute carrier family 38, member 4	protein_coding	Danio_rerio
ENSMUSG00000022464	Slc38a4	solute carrier family 38, member 4	protein_coding	Mus_musculus

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