C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139209-ENSG00000139211 CGP 9606 12:46764761-47079951
GeneTranscriptPositionBiotype
ENSG00000139209 (SLC38A4)
solute carrier family 38, member 4 		ENST00000266579 (SLC38A4-002) 46766016-46825997 protein_coding
ENST00000447411 (SLC38A4-001) 46764761-46825997 protein_coding
ENST00000546940 (SLC38A4-003) 46779949-46832408 protein_coding
ENST00000547477 (SLC38A4-004) 46779780-46825985 protein_coding
ENST00000550670 (SLC38A4-005) 46766303-46769304 protein_coding
ENSG00000139211 (AMIGO2)
adhesion molecule with Ig-like domain 2 		ENST00000266581 (AMIGO2-003) 47075707-47079865 protein_coding
ENST00000429635 (AMIGO2-001) 47076600-47079951 protein_coding
ENST00000550413 (AMIGO2-002) 47076498-47079642 protein_coding
ENSG00000179715 (PCED1B)
PC-esterase domain containing 1B 		ENST00000432328 (PCED1B-201) 47079603-47236662 protein_coding
ENST00000546455 (PCED1B-001) 47079603-47236660 protein_coding
ENST00000548348 (PCED1B-003) 47216587-47235992 protein_coding
ENST00000549500 (PCED1B-004) 47216598-47235565 protein_coding
ENST00000549630 (PCED1B-005) 47223501-47235566 protein_coding
ENST00000551777 (PCED1B-006) 47223545-47235238 protein_coding
ENSG00000257261 (RP11-96H19.1)
 ENST00000551021 (RP11-96H19.1-002) 46384107-46387972 lincRNA
ENST00000551503 (RP11-96H19.1-001) 46383679-46456268 lincRNA
ENST00000611243 (RP11-96H19.1-003) 46387747-46876159 lincRNA
ENSG00000274723 (RP11-618L22.1)
 ENST00000621214 (RP11-618L22.1-001) 46970504-46972155 lincRNA
CIL_0005YP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022464-ENSMUSG00000048218 CGP 10090 15:96994823-97247287
GeneTranscriptPositionBiotype
ENSMUSG00000022464 (Slc38a4)
solute carrier family 38, member 4 		ENSMUST00000023101 (Slc38a4-201) 96994823-97055956 protein_coding
ENSMUST00000166223 (Slc38a4-202) 96996765-97020322 protein_coding
ENSMUSG00000044250 (Pced1b)
PC-esterase domain containing 1B 		ENSMUST00000059433 (Pced1b-201) 97247107-97385689 protein_coding
ENSMUSG00000048218 (Amigo2)
adhesion molecule with Ig like domain 2 		ENSMUST00000053106 (Amigo2-201) 97244074-97247287 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YP_0001ENSG00000139209ENST00000266579ENST00000447411ENST00000546940ENST00000547477ENST00000550670ENSG00000139211ENST00000266581ENST00000429635ENST00000550413ENSG00000179715ENST00000432328ENST00000546455ENST00000548348ENST00000549500ENST00000549630ENST00000551777ENSG00000257261ENST00000551021ENST00000551503ENST00000611243ENSG00000274723ENST00000621214CIL_0005YP_0002ENSMUSG00000022464ENSMUST00000023101ENSMUST00000166223ENSMUSG00000044250ENSMUST00000059433ENSMUSG00000048218ENSMUST00000053106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YP_0001ENSG00000139209ENST00000266579ENST00000447411ENST00000546940ENSG00000139211ENST00000266581ENST00000429635ENST00000550413ENSG00000179715ENST00000432328ENSG00000257261ENST00000551021ENST00000551503ENST00000611243ENSG00000274723ENST00000621214CIL_0005YP_0002ENSMUSG00000022464ENSMUST00000023101ENSMUST00000166223ENSMUSG00000044250ENSMUST00000059433ENSMUSG00000048218ENSMUST00000053106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139209 ENST00000266579 0.032±0.00 N/A N/A 0.120±0.00 N/A 0.411±0.00 N/A 29.386±0.00 N/A 0.090±0.00 0.499±0.00 0.043±0.00 0.174±0.00 0.022±0.00
ENST00000447411 0.035±0.00 N/A N/A 0.032±0.01 N/A 0.170±0.00 0.179±0.00 0.748±0.00 30.822±30.74 N/A 8.733±0.00 0.317±0.00 0.256±0.18 N/A
ENST00000546940 N/A N/A N/A N/A N/A N/A N/A N/A 0.617±0.00 N/A N/A N/A N/A N/A
ENST00000547477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139211 ENST00000266581 N/A N/A 0.880±0.00 0.566±0.00 N/A 0.538±0.00 N/A N/A N/A N/A N/A 4.540±0.00 N/A N/A
ENST00000429635 2.348±0.00 7.537±0.00 N/A 0.840±0.00 3.895±1.94 3.419±2.24 0.671±0.00 2.957±0.00 1.023±0.61 2.020±1.20 N/A 8.346±0.00 2.855±0.00 3.704±0.00
ENST00000550413 2.287±0.00 N/A N/A 0.835±0.00 1.594±0.00 3.148±0.00 0.388±0.30 0.377±0.00 1.280±0.51 N/A 0.228±0.00 9.392±5.55 4.819±2.47 4.605±0.77
ENSG00000179715 ENST00000432328 3.014±0.00 25.213±0.00 N/A N/A N/A N/A N/A N/A N/A 5.541±4.03 0.327±0.00 N/A 4.548±0.58 5.428±0.05
ENST00000546455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257261 ENST00000551021 0.903±0.00 1.003±0.00 N/A 1.048±0.00 0.809±0.00 6.065±0.00 0.761±0.00 2.745±0.00 1.546±0.11 N/A 8.298±2.12 1.103±0.02 0.674±0.43 1.443±0.71
ENST00000551503 0.394±0.00 0.414±0.00 N/A 0.542±0.26 0.617±0.00 0.499±0.00 0.212±0.03 0.551±0.08 0.438±0.28 0.754±0.00 N/A 0.470±0.28 0.188±0.02 0.270±0.01
ENST00000611243 N/A 0.049±0.00 0.129±0.00 0.252±0.15 0.024±0.00 N/A 0.406±0.00 0.027±0.00 0.186±0.00 0.544±0.00 0.154±0.00 0.122±0.01 0.094±0.01 0.055±0.02
ENSG00000274723 ENST00000621214 N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.063±0.00 N/A 0.083±0.00 0.194±0.00 0.040±0.00 N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022464 ENSMUST00000023101 1.115±0.87 0.673±0.44 1.902±0.09 1.307±0.04 4.055±0.74 0.308±0.14 1.971±0.37 0.678±0.33 25.715±14.53 0.978±0.34 19.926±7.59 2.660±1.28 53.964±20.97 0.054±0.02
ENSMUST00000166223 0.258±0.08 1.020±0.39 0.698±0.00 0.558±0.38 4.075±2.02 0.230±0.08 2.158±0.43 0.555±0.22 101.977±73.23 1.519±0.25 15.027±1.82 0.974±0.50 152.792±94.29 0.512±0.48
ENSMUSG00000044250 ENSMUST00000059433 2.451±0.93 5.801±2.43 5.924±0.32 1.404±0.49 8.046±3.54 0.910±0.30 0.637±0.17 1.009±0.37 1.481±0.68 6.023±2.94 0.465±0.18 5.583±2.22 7.156±0.24 1.241±0.63
ENSMUSG00000048218 ENSMUST00000053106 2.284±0.00 N/A 2.093±0.80 1.269±0.42 1.465±0.00 0.324±0.04 0.553±0.13 0.529±0.10 0.621±0.25 3.171±0.05 0.421±0.12 2.485±0.68 1.335±0.47 0.802±0.08

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