C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447411 SLC38A4-001 ENSG00000139209 9606 - 12:46764761-46825997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverMuscleOvaryPlacentaENST00000447411
Transcript ID Adipose Brain Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000447411 0.035±0.00 0.032±0.01 0.170±0.00 0.179±0.00 0.748±0.00 30.822±30.74 8.733±0.00 0.317±0.00 0.256±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YP CIL_0005YP_0001 CGP 12:46764761-47079951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006865 TAS amino acid transport
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166223 Slc38a4-202 protein_coding Mus_musculus 0 1471
ENSMUST00000023101 Slc38a4-201 protein_coding Mus_musculus 0 1471

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