C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: diaphanous-related formin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139734 DIAPH3 9606 - 13:59665583-60163987 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267215 DIAPH3-003 59774059-60163766 protein_coding
  ENST00000377908 DIAPH3-005 59666584-60163766 protein_coding
  ENST00000400319 DIAPH3-006 59666584-60163766 protein_coding
  ENST00000400320 DIAPH3-007 59666584-60163766 protein_coding
  ENST00000400324 DIAPH3-001 59665583-60163987 protein_coding
  ENST00000465066 DIAPH3-008 59774163-60013209 protein_coding
  ENST00000470420 DIAPH3-004 59666741-59696193 processed_transcript
  ENST00000498416 DIAPH3-002 59861254-60013178 protein_coding
  ENST00000615942 DIAPH3-009 59837675-59861432 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000377908ENST00000400319ENST00000400320ENST00000400324ENST00000465066ENST00000498416ENST00000615942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000377908 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.656±0.00 3.428±0.00 5.558±0.00
ENST00000400319 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.097±0.00 N/A 1.934±0.00 N/A N/A
ENST00000400320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.801±0.00 N/A N/A
ENST00000400324 N/A 0.020±0.00 0.056±0.00 N/A N/A 0.115±0.00 N/A N/A 0.107±0.00 N/A 0.813±0.68 0.749±0.01 N/A
ENST00000465066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.311±6.95
ENST00000498416 N/A N/A 0.200±0.00 N/A 0.201±0.00 N/A N/A 0.038±0.03 0.064±0.00 N/A N/A N/A N/A
ENST00000615942 0.093±0.00 0.142±0.00 N/A 0.042±0.00 0.071±0.00 0.068±0.00 0.037±0.00 N/A 0.045±0.00 0.017±0.00 0.013±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MF CIL_0000MF_0001 CGP 13:57631810-60163987
CIL_0000MG CIL_0000MG_0001 CGP 13:59665583-60573878

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007283 IEA spermatogenesis
GO:0016043 IEA cellular component organization
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090785 diaph3 diaphanous homolog 3 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000022021 Diap3 diaphanous homolog 3 (Drosophila) protein_coding Mus_musculus

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