C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000MG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139734-ENSG00000083544 CGP 9606 13:59665583-60573878
GeneTranscriptPositionBiotype
ENSG00000083544 (TDRD3)
tudor domain containing 3 		ENST00000196169 (TDRD3-201) 60396457-60573878 protein_coding
ENST00000377881 (TDRD3-003) 60397334-60573872 protein_coding
ENST00000377882 (TDRD3-005) 60434049-60485899 protein_coding
ENST00000377894 (TDRD3-001) 60396988-60573877 protein_coding
ENST00000463109 (TDRD3-004) 60444687-60461040 processed_transcript
ENST00000471710 (TDRD3-006) 60528963-60538086 retained_intron
ENST00000484389 (TDRD3-002) 60396939-60528837 nonsense_mediated_decay
ENST00000535286 (TDRD3-202) 60397293-60573878 protein_coding
ENST00000621840 (TDRD3-203) 60434047-60573870 protein_coding
ENSG00000223815 (DIAPH3-AS2)
DIAPH3 antisense RNA 2 		ENST00000428656 (DIAPH3-AS2-001) 60144698-60153505 antisense
ENSG00000238213 (TARDBPP2)
TAR DNA binding protein pseudogene 2 		ENST00000448913 (TARDBPP2-001) 60274776-60276006 processed_pseudogene
ENSG00000265745 (RN7SL375P)
RNA, 7SL, cytoplasmic 375, pseudogene 		ENST00000492442 (RN7SL375P-201) 60034465-60034762 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000MG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022021-ENSMUSG00000022019 CGP 10090 14:86655367-87545373
GeneTranscriptPositionBiotype
ENSMUSG00000022021 (Diap3)
diaphanous homolog 3 (Drosophila) 		ENSMUST00000022599 (Diap3-201) 86655367-87141224 protein_coding
ENSMUST00000168889 (Diap3-202) 86656323-87141114 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MG_0001ENSG00000083544ENST00000196169ENST00000377881ENST00000377882ENST00000377894ENST00000463109ENST00000471710ENST00000484389ENST00000535286ENST00000621840ENSG00000223815ENST00000428656ENSG00000238213ENST00000448913ENSG00000265745ENST00000492442CIL_0000MG_0002ENSMUSG00000022021ENSMUST00000022599ENSMUST00000168889
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MG_0001ENSG00000083544ENST00000196169ENST00000377881ENST00000377882ENST00000377894ENST00000471710ENST00000535286ENST00000621840ENSG00000223815ENST00000428656ENSG00000238213ENST00000448913ENSG00000265745ENST00000492442CIL_0000MG_0002ENSMUSG00000022021ENSMUST00000022599ENSMUST00000168889
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083544 ENST00000196169 0.707±0.00 N/A 0.280±0.00 0.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.450±0.00 1.291±0.10
ENST00000377881 N/A 2.046±0.00 N/A 1.402±0.68 2.180±0.00 2.788±0.00 2.458±0.06 N/A N/A 1.581±0.33 0.889±0.00 1.812±1.14 1.113±0.00 3.768±0.00
ENST00000377882 N/A N/A 1.439±0.00 3.524±0.00 3.778±0.00 N/A 6.920±0.00 4.950±0.00 7.962±0.00 6.700±0.00 3.043±0.00 N/A N/A N/A
ENST00000377894 N/A N/A N/A N/A N/A N/A N/A 1.844±1.42 0.434±0.00 N/A N/A 1.758±0.61 0.861±0.48 4.714±0.00
ENST00000463109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471710 0.512±0.00 0.731±0.00 N/A 0.844±0.02 0.919±0.37 1.142±0.00 1.085±0.00 0.475±0.00 0.646±0.38 0.652±0.35 0.978±0.00 0.849±0.31 0.235±0.05 N/A
ENST00000484389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535286 1.318±0.00 N/A N/A N/A 1.226±0.00 3.461±0.00 N/A N/A N/A N/A N/A 1.462±0.00 N/A N/A
ENST00000621840 N/A N/A 0.257±0.00 N/A N/A 1.691±0.00 N/A 2.418±0.00 N/A 1.195±0.00 1.928±1.51 2.149±0.02 0.772±0.00 1.673±0.00
ENSG00000223815 ENST00000428656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A 8.072±0.00
ENSG00000238213 ENST00000448913 0.010±0.00 0.064±0.00 N/A N/A 0.043±0.00 N/A N/A 0.032±0.00 N/A 0.040±0.00 N/A 0.013±0.00 N/A 0.022±0.01
ENSG00000265745 ENST00000492442 N/A 0.235±0.00 N/A 0.063±0.00 N/A N/A N/A 0.059±0.00 N/A 0.057±0.00 N/A 0.208±0.06 N/A 0.161±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022021 ENSMUST00000022599 0.121±0.07 0.067±0.02 N/A 0.123±0.00 0.187±0.13 0.414±0.03 0.091±0.03 0.049±0.01 0.016±0.00 0.153±0.09 0.040±0.02 0.621±0.24 0.587±0.00 0.739±0.08
ENSMUST00000168889 0.032±0.01 N/A N/A 0.123±0.00 0.054±0.01 N/A N/A 0.039±0.00 0.043±0.03 0.077±0.00 0.024±0.00 2.244±1.94 1.590±1.09 2.501±1.91

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