C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tryptophanyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140105 WARS 9606 - 14:100333788-100376805 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344102 WARS-006 100333828-100375608 protein_coding
  ENST00000355338 WARS-005 100333818-100376805 protein_coding
  ENST00000358655 WARS-004 100333802-100376335 protein_coding
  ENST00000392882 WARS-001 100333788-100375644 protein_coding
  ENST00000553395 WARS-025 100346769-100375607 protein_coding
  ENST00000553413 WARS-011 100360654-100376311 protein_coding
  ENST00000553524 WARS-009 100354539-100376334 protein_coding
  ENST00000553545 WARS-024 100361730-100375607 protein_coding
  ENST00000553581 WARS-015 100369109-100376308 protein_coding
  ENST00000553769 WARS-013 100361708-100376309 protein_coding
  ENST00000553808 WARS-002 100354193-100375473 retained_intron
  ENST00000553934 WARS-022 100369087-100375744 protein_coding
  ENST00000554084 WARS-042 100352883-100361923 processed_transcript
  ENST00000554331 WARS-010 100354302-100376330 retained_intron
  ENST00000554509 WARS-035 100361807-100375347 protein_coding
  ENST00000554601 WARS-043 100342050-100346829 protein_coding
  ENST00000554605 WARS-014 100361817-100376309 protein_coding
  ENST00000554772 WARS-017 100360603-100376307 protein_coding
  ENST00000554820 WARS-029 100361763-100375475 protein_coding
  ENST00000554950 WARS-041 100334927-100354423 retained_intron
  ENST00000555031 WARS-026 100361856-100375593 protein_coding
  ENST00000555063 WARS-008 100354401-100376343 retained_intron
  ENST00000555410 WARS-033 100354560-100375355 protein_coding
  ENST00000555464 WARS-027 100370379-100375547 processed_transcript
  ENST00000555813 WARS-036 100361831-100375344 protein_coding
  ENST00000556209 WARS-021 100361810-100376285 protein_coding
  ENST00000556295 WARS-032 100361847-100375467 protein_coding
  ENST00000556338 WARS-023 100354445-100375612 protein_coding
  ENST00000556435 WARS-040 100353828-100376302 protein_coding
  ENST00000556504 WARS-020 100346778-100376287 protein_coding
  ENST00000556579 WARS-019 100360524-100376299 retained_intron
  ENST00000556645 WARS-003 100334493-100376251 protein_coding
  ENST00000556660 WARS-039 100360632-100374942 protein_coding
  ENST00000556695 WARS-038 100361845-100374949 protein_coding
  ENST00000556698 WARS-034 100354531-100375347 protein_coding
  ENST00000556783 WARS-018 100360642-100376305 nonsense_mediated_decay
  ENST00000557094 WARS-031 100361703-100375473 retained_intron
  ENST00000557135 WARS-007 100334479-100375347 protein_coding
  ENST00000557239 WARS-016 100354531-100376308 processed_transcript
  ENST00000557297 WARS-037 100353826-100375333 protein_coding
  ENST00000557347 WARS-030 100361802-100375475 nonsense_mediated_decay
  ENST00000557614 WARS-044 100336841-100342534 retained_intron
  ENST00000557722 WARS-012 100353774-100376311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344102ENST00000358655ENST00000392882ENST00000553769ENST00000554772ENST00000554950ENST00000556579ENST00000557135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.793±0.00 N/A
ENST00000358655 24.817±0.00 81.551±0.00 6.856±0.00 18.543±9.81 45.529±0.00 12.554±9.63 28.784±23.14 25.670±22.00 10.221±0.00 125.471±112.39 37.004±0.00 15.717±2.34 220.048±141.58 28.957±0.24
ENST00000392882 N/A N/A N/A N/A N/A 2.825±0.00 N/A N/A N/A 8.049±0.00 2.014±0.00 6.638±2.42 N/A N/A
ENST00000553769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.848±0.00 N/A N/A N/A
ENST00000554772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.169±0.00 104.334±0.00 N/A
ENST00000554950 N/A N/A N/A N/A N/A N/A 4.311±0.00 N/A N/A 17.695±0.00 N/A N/A N/A N/A
ENST00000556579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.701±0.00 N/A N/A
ENST00000557135 N/A N/A N/A 4.682±0.00 N/A 5.072±0.00 3.384±0.00 N/A N/A N/A 3.166±0.00 5.605±2.12 32.863±0.00 35.159±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AG CIL_0004AG_0001 CGP 14:100323337-100376805
CIL_0004AF CIL_0004AF_0001 CGP 14:100333788-100530303

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IEA angiogenesis
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004830 IEA:NAS tryptophan-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA:IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006436 IEA:NAS tryptophanyl-tRNA aminoacylation
GO:0008152 IEA metabolic process
GO:0008285 TAS negative regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0045765 IDA regulation of angiogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073930 WARS tryptophanyl-tRNA synthetase protein_coding Danio_rerio
ENSMUSG00000021266 Wars tryptophanyl-tRNA synthetase protein_coding Mus_musculus

Loading