C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tryptophanyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021266 Wars 10090 - 12:108860030-108894174 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109848 Wars-001 108860030-108894174 protein_coding
  ENSMUST00000160477 Wars-002 108860030-108894137 nonsense_mediated_decay
  ENSMUST00000160974 Wars-006 108880756-108888417 retained_intron
  ENSMUST00000161154 Wars-004 108860034-108893197 protein_coding
  ENSMUST00000161410 Wars-003 108860030-108893198 protein_coding
  ENSMUST00000162748 Wars-005 108875114-108894101 nonsense_mediated_decay
  ENSMUST00000162952 Wars-007 108865871-108875281 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109848ENSMUST00000160477ENSMUST00000161154ENSMUST00000161410ENSMUST00000162952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109848 24.084±3.49 7.079±1.42 22.125±4.99 21.304±8.31 23.651±11.15 51.668±13.78 10.682±2.26 19.827±2.57 9.448±6.02 30.718±9.67 10.613±0.82 22.688±14.01 13.581±4.24 11.288±5.90
ENSMUST00000160477 N/A 23.634±5.61 N/A N/A 23.753±0.00 N/A N/A N/A 1.840±0.00 N/A N/A 20.583±5.90 N/A N/A
ENSMUST00000161154 N/A N/A N/A N/A N/A N/A N/A N/A 2.569±0.59 N/A N/A N/A N/A 0.656±0.00
ENSMUST00000161410 13.817±1.19 5.745±1.40 6.692±0.00 5.590±0.00 11.316±5.80 17.459±2.49 6.282±1.99 3.948±0.86 N/A 17.252±7.03 1.762±0.22 9.750±1.52 10.321±5.40 4.222±0.00
ENSMUST00000162952 N/A N/A N/A N/A N/A N/A N/A N/A 5.703±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AG CIL_0004AG_0002 CGP 12:108851129-108894174
CIL_0004AF CIL_0004AF_0002 CGP 12:108860030-109028452

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004830 IEA tryptophan-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006436 IEA tryptophanyl-tRNA aminoacylation
GO:0045765 IEA regulation of angiogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073930 WARS tryptophanyl-tRNA synthetase protein_coding Danio_rerio
ENSG00000140105 WARS tryptophanyl-tRNA synthetase protein_coding Homo_sapiens

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