C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophanyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358655 WARS-004 ENSG00000140105 9606 - 14:100333802-100376335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358655 24.817±0.00 81.551±0.00 6.856±0.00 18.543±9.81 45.529±0.00 12.554±9.63 28.784±23.14 25.670±22.00 10.221±0.00 125.471±112.39 37.004±0.00 15.717±2.34 220.048±141.58 28.957±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AG CIL_0004AG_0001 CGP 14:100323337-100376805
CIL_0004AF CIL_0004AF_0001 CGP 14:100333788-100530303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IEA angiogenesis
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004830 IEA:NAS tryptophan-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA:IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006436 IEA:NAS tryptophanyl-tRNA aminoacylation
GO:0008285 TAS negative regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0045765 IDA regulation of angiogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160477 Wars-002 nonsense_mediated_decay Mus_musculus 0 1519
ENSMUST00000161410 Wars-003 protein_coding Mus_musculus 0 1517
ENSMUST00000109848 Wars-001 protein_coding Mus_musculus 0 1517
ENSMUST00000161154 Wars-004 protein_coding Mus_musculus 0 1515
ENSMUST00000162952 Wars-007 retained_intron Mus_musculus 0 669

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