C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140350 ANP32A 9606 - 15:68778535-68820897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267918 ANP32A-006 68779743-68817599 processed_transcript
  ENST00000409628 ANP32A-003 68778907-68820868 nonsense_mediated_decay
  ENST00000465139 ANP32A-001 68778535-68820895 protein_coding
  ENST00000480858 ANP32A-009 68782772-68784466 retained_intron
  ENST00000483221 ANP32A-007 68812946-68817715 processed_transcript
  ENST00000483551 ANP32A-002 68780072-68792248 processed_transcript
  ENST00000486054 ANP32A-004 68779324-68781605 retained_intron
  ENST00000495420 ANP32A-008 68787179-68820897 retained_intron
  ENST00000495764 ANP32A-005 68787413-68817615 processed_transcript
  ENST00000560303 ANP32A-010 68780420-68820886 protein_coding
  ENST00000561430 ANP32A-012 68784271-68787829 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267918ENST00000409628ENST00000465139ENST00000483551ENST00000560303ENST00000561430
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267918 13.774±0.00 N/A 1.249±0.00 17.098±0.00 12.760±0.00 26.392±0.00 N/A N/A N/A N/A N/A N/A N/A 12.699±0.00
ENST00000409628 17.234±0.00 15.339±0.00 1.390±0.00 15.293±10.74 6.519±5.32 14.100±11.52 8.287±6.59 13.702±12.04 7.702±3.24 15.414±14.29 7.755±6.80 17.436±9.24 26.150±8.26 9.108±2.38
ENST00000465139 6.300±0.00 13.021±0.00 1.203±0.00 7.059±3.61 5.206±2.18 5.150±0.00 2.693±0.44 5.924±3.79 2.859±0.80 3.919±1.91 0.689±0.00 9.204±4.73 13.873±0.20 5.240±0.00
ENST00000483551 N/A N/A 0.855±0.00 N/A 0.888±0.00 0.604±0.00 N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A
ENST00000560303 29.343±0.00 19.756±0.00 N/A N/A 17.757±0.00 5.853±0.00 19.948±0.00 N/A 8.455±3.09 N/A 21.521±0.00 50.609±4.71 33.692±6.06 8.079±0.00
ENST00000561430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 80.259±0.00 54.464±0.00 18.976±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080E CIL_00080E_0001 VISTA 15:68398610-69001346
CIL_0008FN CIL_0008FN_0001 VISTA 15:68430786-69031787
CIL_0004GY CIL_0004GY_0002 CGP 15:68578969-68820897

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006913 NAS nucleocytoplasmic transport
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0035556 TAS intracellular signal transduction
GO:0044822 IDA poly(A) RNA binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006487 anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein_coding Danio_rerio
ENSMUSG00000032249 Anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein_coding Mus_musculus

Loading