C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465139 ANP32A-001 ENSG00000140350 9606 - 15:68778535-68820895 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000465139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000465139 6.300±0.00 13.021±0.00 1.203±0.00 7.059±3.61 5.206±2.18 5.150±0.00 2.693±0.44 5.924±3.79 2.859±0.80 3.919±1.91 0.689±0.00 9.204±4.73 13.873±0.20 5.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080E CIL_00080E_0001 VISTA 15:68398610-69001346
CIL_0008FN CIL_0008FN_0001 VISTA 15:68430786-69031787
CIL_0004GY CIL_0004GY_0002 CGP 15:68578969-68820897

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006913 NAS nucleocytoplasmic transport
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0035556 TAS intracellular signal transduction
GO:0044822 IDA poly(A) RNA binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085519 Anp32a-001 protein_coding Mus_musculus 0 1485
ENSMUST00000138226 Anp32a-003 processed_transcript Mus_musculus 0 865
ENSMUST00000135395 Anp32a-004 protein_coding Mus_musculus 0 854
ENSMUST00000129026 Anp32a-008 processed_transcript Mus_musculus 0 658
ENSMUST00000145679 Anp32a-010 retained_intron Mus_musculus 0 616
ENSMUST00000128636 Anp32a-002 protein_coding Mus_musculus 0 604
ENSMUST00000126451 Anp32a-007 processed_transcript Mus_musculus 0 603
ENSMUST00000136603 Anp32a-006 processed_transcript Mus_musculus 0 523
ENSMUST00000156461 Anp32a-005 protein_coding Mus_musculus 0 451
ENSMUST00000141277 Anp32a-009 processed_transcript Mus_musculus 0 448
ENSDART00000114041 anp32a-201 protein_coding Danio_rerio 0 440
ENSDART00000008785 anp32a-001 protein_coding Danio_rerio 0 440
ENSDART00000146420 anp32a-002 protein_coding Danio_rerio 0 416
ENSDART00000143514 anp32a-003 processed_transcript Danio_rerio 0 390

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