C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (sodium/glucose cotransporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140675 SLC5A2 9606 + 16:31483002-31490860 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330498 SLC5A2-001 31483118-31490768 protein_coding
  ENST00000419665 SLC5A2-002 31483118-31490669 nonsense_mediated_decay
  ENST00000562006 SLC5A2-004 31483138-31485616 retained_intron
  ENST00000564197 SLC5A2-008 31489489-31490860 processed_transcript
  ENST00000565446 SLC5A2-006 31484747-31486276 retained_intron
  ENST00000567051 SLC5A2-009 31489489-31490845 processed_transcript
  ENST00000568188 SLC5A2-003 31488020-31490769 retained_intron
  ENST00000568891 SLC5A2-010 31488210-31490344 retained_intron
  ENST00000569576 SLC5A2-005 31483002-31486276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000330498
Transcript ID Kidney
ENST00000330498 24.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_000708 CIL_000708_0001 CGP 16:31471585-31490860
CIL_00035J CIL_00035J_0001 CGP 16:31483002-31509309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005362 TAS low-affinity glucose:sodium symporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006810 TAS:IEA transport
GO:0006814 IEA sodium ion transport
GO:0015758 TAS glucose transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA:TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002129 slc5a2 solute carrier family 5 (sodium/glucose cotransporter), member 2 protein_coding Danio_rerio
ENSMUSG00000030781 Slc5a2 solute carrier family 5 (sodium/glucose cotransporter), member 2 protein_coding Mus_musculus

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