C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (sodium/glucose cotransporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030781 Slc5a2 10090 + 7:128265657-128272430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033045 Slc5a2-007 128266300-128270064 processed_transcript
  ENSMUST00000118169 Slc5a2-001 128265676-128272430 protein_coding
  ENSMUST00000136345 Slc5a2-005 128266370-128266774 retained_intron
  ENSMUST00000137038 Slc5a2-006 128267391-128269987 nonsense_mediated_decay
  ENSMUST00000142841 Slc5a2-003 128265695-128269143 protein_coding
  ENSMUST00000146735 Slc5a2-002 128265657-128266717 retained_intron
  ENSMUST00000153418 Slc5a2-004 128266343-128267478 processed_transcript
  ENSMUST00000171335 Slc5a2-008 128266958-128268992 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSMUST00000118169
Transcript ID Kidney
ENSMUST00000118169 297.410±99.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000708 CIL_000708_0002 CGP 7:128246812-128272430
CIL_00035J CIL_00035J_0002 CGP 7:128265657-128298170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0006814 IEA sodium ion transport
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002129 slc5a2 solute carrier family 5 (sodium/glucose cotransporter), member 2 protein_coding Danio_rerio
ENSG00000140675 SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2 protein_coding Homo_sapiens

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