C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330498 SLC5A2-001 ENSG00000140675 9606 + 16:31483118-31490768 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000330498
Transcript ID Kidney
ENST00000330498 24.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_000708 CIL_000708_0001 CGP 16:31471585-31490860
CIL_00035J CIL_00035J_0001 CGP 16:31483002-31509309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005362 TAS low-affinity glucose:sodium symporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006810 TAS:IEA transport
GO:0006814 IEA sodium ion transport
GO:0015758 TAS glucose transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA:TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118169 Slc5a2-001 protein_coding Mus_musculus 0 2036
ENSMUST00000033045 Slc5a2-007 processed_transcript Mus_musculus 0 963
ENSMUST00000142841 Slc5a2-003 protein_coding Mus_musculus 0 785
ENSMUST00000148584 Slc5a10-002 protein_coding Mus_musculus 0 244
ENSMUST00000051552 Slc5a10-001 protein_coding Mus_musculus 0 244
ENSMUST00000151780 Slc5a10-004 protein_coding Mus_musculus 0 244
ENSMUST00000128196 Slc5a10-003 processed_transcript Mus_musculus 0 244

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