C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunoglobulin superfamily, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140749 IGSF6 9606 - 16:21639537-21652660 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268389 IGSF6-001 21639537-21652660 protein_coding
  ENST00000565499 IGSF6-002 21646386-21652608 retained_intron
  ENST00000569602 IGSF6-003 21644290-21652606 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000268389
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000268389 8.290±0.00 3.671±0.53 0.777±0.00 0.929±0.00 1.307±0.14 4.385±0.47 2.290±0.64 3.520±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HL CIL_0003HL_0001 CGP 16:21597218-21657473
CIL_0003I0 CIL_0003I0_0001 CGP 16:21639537-21760729

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006955 TAS immune response
GO:0007166 TAS cell surface receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000035004 Igsf6 immunoglobulin superfamily, member 6 protein_coding Mus_musculus

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