C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin superfamily, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268389 IGSF6-001 ENSG00000140749 9606 - 16:21639537-21652660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000268389
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000268389 8.290±0.00 3.671±0.53 0.777±0.00 0.929±0.00 1.307±0.14 4.385±0.47 2.290±0.64 3.520±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HL CIL_0003HL_0001 CGP 16:21597218-21657473
CIL_0003I0 CIL_0003I0_0001 CGP 16:21639537-21760729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006955 TAS immune response
GO:0007166 TAS cell surface receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047194 Igsf6-201 protein_coding Mus_musculus 0 427

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